RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 GNPATO15228 680 aa9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 PTCD1O75127 700 aaKnown RBP9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 RPS6KA4O75676 772 aa9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 ZEB1P37275 1124 aaPredicted RBP9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 DDX10Q13206 875 aaKnown RBP9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 SMIM5Q71RC9 77 aa9.91□□□□□ -0.82
UBE2CP4-201ENST00000561405 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
UBE2CP4-201ENST00000561405 RTCBQ9Y3I0 505 aaKnown RBP9.9□□□□□ -0.82
UBE2CP4-201ENST00000561405 HTATSF1O43719 755 aaKnown RBP9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 PHF14O94880 888 aa9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 MSL1Q68DK7 614 aa9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
UBE2CP4-201ENST00000561405 C4AP0C0L4 1744 aa9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 CYP19A1P11511 503 aaPredicted RBP9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 INTS5Q6P9B9 1019 aaKnown RBP9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
UBE2CP4-201ENST00000561405 MYBBP1AQ9BQG0 1328 aaKnown RBP9.87□□□□□ -0.83
UBE2CP4-201ENST00000561405 TEFQ10587 303 aa9.87□□□□□ -0.83
UBE2CP4-201ENST00000561405 CD2APQ9Y5K6 639 aa9.87□□□□□ -0.83
UBE2CP4-201ENST00000561405 DLG5Q8TDM6 1919 aa9.87□□□□□ -0.83
UBE2CP4-201ENST00000561405 GYS1P13807 737 aa9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 ZNF496Q96IT1 587 aaPredicted RBP9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 KIF13BQ9NQT8 1826 aa9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 HEG1Q9ULI3 1381 aa9.86□□□□□ -0.83
UBE2CP4-201ENST00000561405 UTRNP46939 3433 aa9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 SOS1Q07889 1333 aaPredicted RBP9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 USP42Q9H9J4 1324 aaKnown RBP9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 RFC4P35249 363 aa9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 RTF1Q92541 710 aaKnown RBP9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 CHD4Q14839 1912 aa9.85□□□□□ -0.83
UBE2CP4-201ENST00000561405 BTBD11A6QL63 1104 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 MMP10P09238 476 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 NFE2L2Q16236 605 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 MCM10Q7L590 875 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 PRKRIP1Q9H875 184 aaPredicted RBP9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 ZBTB1Q9Y2K1 713 aa9.84□□□□□ -0.83
UBE2CP4-201ENST00000561405 KCNQ3O43525 872 aa9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 STARD3NLO95772 234 aa9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 NEFMP07197 916 aa9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 EIF5P55010 431 aaKnown RBP9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 TAF7Q15545 349 aaPredicted RBP9.83□□□□□ -0.84
UBE2CP4-201ENST00000561405 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 KIAA1551Q9HCM1 1747 aa9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 NARFQ9UHQ1 456 aa9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 COL15A1P39059 1388 aa9.82□□□□□ -0.84
UBE2CP4-201ENST00000561405 KDM3BQ7LBC6 1761 aa9.81□□□□□ -0.84
UBE2CP4-201ENST00000561405 TM4SF1P30408 202 aa9.81□□□□□ -0.84
UBE2CP4-201ENST00000561405 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
UBE2CP4-201ENST00000561405 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
UBE2CP4-201ENST00000561405 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
UBE2CP4-201ENST00000561405 NRXN2Q9P2S2 1712 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 POLRMTO00411 1230 aaKnown RBP9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 ZPR1O75312 459 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 YBX3P16989 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 YY1P25490 414 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 IL6STP40189 918 aaPredicted RBP9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 NUBP1P53384 320 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 TGFB2P61812 414 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 DDR1Q08345 913 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 GPR162Q16538 588 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 USP16Q9Y5T5 823 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 MAPK8IP3Q9UPT6 1336 aa9.8□□□□□ -0.84
UBE2CP4-201ENST00000561405 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 A0A087WZG4 1122 aa9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 TMPOP42166 694 aaKnown RBP9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 AFDNP55196 1824 aaKnown RBP9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 BRCA1P38398 1863 aaKnown RBP9.79□□□□□ -0.84
UBE2CP4-201ENST00000561405 SCN7AQ01118 1682 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 A1BGP04217 495 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 RIPK4P57078 832 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 NFIXQ14938 502 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 THUMPD2Q9BTF0 503 aaKnown RBP9.78□□□□□ -0.84
UBE2CP4-201ENST00000561405 BABAM1Q9NWV8 329 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms