RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 RHOQP17081 205 aa8.88□□□□□ -0.99
AP4E1-206ENST00000561397 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
AP4E1-206ENST00000561397 SCHIP1Q9P0W5 487 aaPredicted RBP8.88□□□□□ -0.99
AP4E1-206ENST00000561397 CENPCQ03188 943 aa8.87□□□□□ -0.99
AP4E1-206ENST00000561397 POTEAQ6S8J7 498 aa8.87□□□□□ -0.99
AP4E1-206ENST00000561397 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
AP4E1-206ENST00000561397 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
AP4E1-206ENST00000561397 CXXC1Q9P0U4 656 aaPredicted RBP8.87□□□□□ -0.99
AP4E1-206ENST00000561397 USP3Q9Y6I4 520 aa8.87□□□□□ -0.99
AP4E1-206ENST00000561397 CDK2AP1O14519 115 aa8.86□□□□□ -0.99
AP4E1-206ENST00000561397 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
AP4E1-206ENST00000561397 TSPAN10Q9H1Z9 355 aaPredicted RBP8.86□□□□□ -0.99
AP4E1-206ENST00000561397 CDC14CA4D256 554 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 LGR5O75473 907 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 IGFBP4P22692 258 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 ATP2B4P23634 1241 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 POU4F2Q12837 409 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 TLR1Q15399 786 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 TAS1R3Q7RTX0 852 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
AP4E1-206ENST00000561397 COL25A1Q9BXS0 654 aaPredicted RBP8.85□□□□□ -0.99
AP4E1-206ENST00000561397 PRMT3O60678 531 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
AP4E1-206ENST00000561397 KCTD17Q8N5Z5 321 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 CNTNAP3BQ96NU0 1288 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 CNTNAP3Q9BZ76 1288 aa8.84□□□□□ -0.99
AP4E1-206ENST00000561397 SPATA31C2B4DYI2 1134 aa8.83□□□□□ -1
AP4E1-206ENST00000561397 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
AP4E1-206ENST00000561397 SLC9A9Q8IVB4 645 aa8.83□□□□□ -1
AP4E1-206ENST00000561397 STAG2Q8N3U4 1231 aa8.83□□□□□ -1
AP4E1-206ENST00000561397 KCNA1Q09470 495 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
AP4E1-206ENST00000561397 SLC27A3Q5K4L6 730 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 NBPF10Q6P3W6 841 aaKnown RBP8.82□□□□□ -1
AP4E1-206ENST00000561397 SV2AQ7L0J3 742 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 TXNDC2Q86VQ3 553 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 NBPF15Q8N660 670 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 ATAD2Q6PL18 1390 aa8.82□□□□□ -1
AP4E1-206ENST00000561397 FOXO3O43524 673 aa8.81□□□□□ -1
AP4E1-206ENST00000561397 ZDHHC1Q8WTX9 485 aa8.81□□□□□ -1
AP4E1-206ENST00000561397 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
AP4E1-206ENST00000561397 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
AP4E1-206ENST00000561397 GNEQ9Y223 722 aaKnown RBP8.81□□□□□ -1
AP4E1-206ENST00000561397 HIRAP54198 1017 aaPredicted RBP8.8□□□□□ -1
AP4E1-206ENST00000561397 TEAD4Q15561 434 aa8.8□□□□□ -1
AP4E1-206ENST00000561397 DBN1Q16643 649 aa8.8□□□□□ -1
AP4E1-206ENST00000561397 TBCELQ5QJ74 424 aa8.8□□□□□ -1
AP4E1-206ENST00000561397 COL26A1Q96A83 441 aa8.8□□□□□ -1
AP4E1-206ENST00000561397 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
AP4E1-206ENST00000561397 DYRK1BQ9Y463 629 aa8.8□□□□□ -1
AP4E1-206ENST00000561397 SCNN1AP37088 669 aa8.79□□□□□ -1
AP4E1-206ENST00000561397 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
AP4E1-206ENST00000561397 TRIM26Q12899 539 aaPredicted RBP8.79□□□□□ -1
AP4E1-206ENST00000561397 GAS6Q14393 721 aa8.79□□□□□ -1
AP4E1-206ENST00000561397 WDR44Q5JSH3 913 aa8.79□□□□□ -1
AP4E1-206ENST00000561397 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
AP4E1-206ENST00000561397 ZNF837Q96EG3 531 aaPredicted RBP8.79□□□□□ -1
AP4E1-206ENST00000561397 EML1O00423 815 aa8.78□□□□□ -1
AP4E1-206ENST00000561397 CAPN12Q6ZSI9 719 aa8.78□□□□□ -1
AP4E1-206ENST00000561397 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
AP4E1-206ENST00000561397 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
AP4E1-206ENST00000561397 PATL2C9JE40 543 aaKnown RBP8.77□□□□□ -1.01
AP4E1-206ENST00000561397 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1.01
AP4E1-206ENST00000561397 THBS1P07996 1170 aa8.77□□□□□ -1.01
AP4E1-206ENST00000561397 SLURP2P0DP57 97 aa8.77□□□□□ -1.01
AP4E1-206ENST00000561397 C4orf17Q53FE4 359 aa8.77□□□□□ -1.01
AP4E1-206ENST00000561397 ARID4AP29374 1257 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-206ENST00000561397 NOS2P35228 1153 aa8.76□□□□□ -1.01
AP4E1-206ENST00000561397 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
AP4E1-206ENST00000561397 WHAMMQ8TF30 809 aa8.76□□□□□ -1.01
AP4E1-206ENST00000561397 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-206ENST00000561397 NIFKQ9BYG3 293 aaKnown RBP8.76□□□□□ -1.01
AP4E1-206ENST00000561397 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
AP4E1-206ENST00000561397 ZNF385CQ66K41 422 aaPredicted RBP8.75□□□□□ -1.01
AP4E1-206ENST00000561397 TMEM214Q6NUQ4 689 aaKnown RBP8.75□□□□□ -1.01
AP4E1-206ENST00000561397 RIPOR1Q6ZS17 1223 aa8.75□□□□□ -1.01
AP4E1-206ENST00000561397 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
AP4E1-206ENST00000561397 SERTM1A2A2V5 107 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 GPR25O00155 361 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 PHKA2P46019 1235 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 CABP1Q9NZU7 370 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 SEPT3Q9UH03 358 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
AP4E1-206ENST00000561397 GNASQ5JWF2 1037 aa8.73□□□□□ -1.01
AP4E1-206ENST00000561397 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
AP4E1-206ENST00000561397 MKNK1Q9BUB5 465 aa8.73□□□□□ -1.01
AP4E1-206ENST00000561397 QTRT2Q9H974 415 aaKnown RBP8.73□□□□□ -1.01
AP4E1-206ENST00000561397 F11P03951 625 aa8.72□□□□□ -1.01
AP4E1-206ENST00000561397 SVOPQ8N4V2 548 aa8.72□□□□□ -1.01
AP4E1-206ENST00000561397 CCER1Q8TC90 406 aaPredicted RBP8.72□□□□□ -1.01
AP4E1-206ENST00000561397 GTPBP3Q969Y2 492 aaKnown RBP8.72□□□□□ -1.01
AP4E1-206ENST00000561397 MYO19Q96H55 970 aa8.72□□□□□ -1.01
AP4E1-206ENST00000561397 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
AP4E1-206ENST00000561397 ADAMTS2O95450 1211 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms