RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
AP4E1-205ENST00000561393 MEX3CQ5U5Q3 659 aaKnown RBP19.74■□□□□ 0.75
AP4E1-205ENST00000561393 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
AP4E1-205ENST00000561393 STARD3NLO95772 234 aa19.73■□□□□ 0.75
AP4E1-205ENST00000561393 LRRFIP1Q32MZ4 808 aaKnown RBP19.73■□□□□ 0.75
AP4E1-205ENST00000561393 PA2G4Q9UQ80 394 aaKnown RBP19.73■□□□□ 0.75
AP4E1-205ENST00000561393 RICTORQ6R327 1708 aa19.73■□□□□ 0.75
AP4E1-205ENST00000561393 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
AP4E1-205ENST00000561393 SKOR2Q2VWA4 1001 aaPredicted RBP19.73■□□□□ 0.75
AP4E1-205ENST00000561393 GNL2Q13823 731 aaKnown RBP19.72■□□□□ 0.75
AP4E1-205ENST00000561393 ZNF790Q6PG37 636 aa19.72■□□□□ 0.75
AP4E1-205ENST00000561393 GRM8O00222 908 aa19.72■□□□□ 0.75
AP4E1-205ENST00000561393 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
AP4E1-205ENST00000561393 MED14O60244 1454 aa19.72■□□□□ 0.75
AP4E1-205ENST00000561393 DCAF5Q96JK2 942 aa19.72■□□□□ 0.75
AP4E1-205ENST00000561393 EXOC5O00471 708 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
AP4E1-205ENST00000561393 CEP126Q9P2H0 1117 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 LINS1Q8NG48 757 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 PNMA6EA0A0J9YXQ4 647 aa19.71■□□□□ 0.75
AP4E1-205ENST00000561393 SETD1BQ9UPS6 1966 aaKnown RBP19.7■□□□□ 0.74
AP4E1-205ENST00000561393 BABAM1Q9NWV8 329 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 HIP1O00291 1037 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 MCM4P33991 863 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 H3BQV1 296 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 GPTP24298 496 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 IFFO2Q5TF58 517 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 CPS1P31327 1500 aa19.7■□□□□ 0.74
AP4E1-205ENST00000561393 NBPF7P0C2Y1 421 aaPredicted RBP19.69■□□□□ 0.74
AP4E1-205ENST00000561393 IL2RBP14784 551 aa19.69■□□□□ 0.74
AP4E1-205ENST00000561393 MCM2P49736 904 aa19.69■□□□□ 0.74
AP4E1-205ENST00000561393 ECHDC1Q9NTX5 307 aa19.69■□□□□ 0.74
AP4E1-205ENST00000561393 DLC1Q96QB1 1528 aa19.69■□□□□ 0.74
AP4E1-205ENST00000561393 ALDH1L1O75891 902 aa19.69■□□□□ 0.74
AP4E1-205ENST00000561393 FKBP4Q02790 459 aaKnown RBP eCLIP19.69■□□□□ 0.74
AP4E1-205ENST00000561393 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
AP4E1-205ENST00000561393 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
AP4E1-205ENST00000561393 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
AP4E1-205ENST00000561393 ZNF496Q96IT1 587 aaPredicted RBP19.67■□□□□ 0.74
AP4E1-205ENST00000561393 FOSBP53539 338 aa19.67■□□□□ 0.74
AP4E1-205ENST00000561393 CCDC158Q5M9N0 1113 aa19.67■□□□□ 0.74
AP4E1-205ENST00000561393 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
AP4E1-205ENST00000561393 JAKMIP1Q96N16 626 aaKnown RBP19.67■□□□□ 0.74
AP4E1-205ENST00000561393 SOS1Q07889 1333 aaPredicted RBP19.66■□□□□ 0.74
AP4E1-205ENST00000561393 BRPF1P55201 1214 aaPredicted RBP19.66■□□□□ 0.74
AP4E1-205ENST00000561393 PTPRUQ92729 1446 aa19.66■□□□□ 0.74
AP4E1-205ENST00000561393 PSMA5P28066 241 aa19.66■□□□□ 0.74
AP4E1-205ENST00000561393 MYO3AQ8NEV4 1616 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 HOXB7P09629 217 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 TTC39AQ5SRH9 613 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 CYP46A1Q9Y6A2 500 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 RTL1A6NKG5 1358 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 SLC52A2Q9HAB3 445 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 BTG4Q9NY30 223 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 ANKARQ7Z5J8 1434 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 PRPF40AO75400 957 aaKnown RBP19.65■□□□□ 0.74
AP4E1-205ENST00000561393 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
AP4E1-205ENST00000561393 LARP6Q9BRS8 491 aaKnown RBP19.65■□□□□ 0.74
AP4E1-205ENST00000561393 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
AP4E1-205ENST00000561393 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
AP4E1-205ENST00000561393 CWC25Q9NXE8 425 aaPredicted RBP19.64■□□□□ 0.73
AP4E1-205ENST00000561393 KIF3AQ9Y496 699 aa19.64■□□□□ 0.73
AP4E1-205ENST00000561393 CSPP1Q1MSJ5 1256 aa19.63■□□□□ 0.73
AP4E1-205ENST00000561393 LMBR1LQ6UX01 489 aa19.63■□□□□ 0.73
AP4E1-205ENST00000561393 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
AP4E1-205ENST00000561393 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.63■□□□□ 0.73
AP4E1-205ENST00000561393 ARHGEF28Q8N1W1 1705 aaKnown RBP19.63■□□□□ 0.73
AP4E1-205ENST00000561393 DNTTIP2Q5QJE6 756 aaKnown RBP19.63■□□□□ 0.73
AP4E1-205ENST00000561393 SIRT2Q8IXJ6 389 aa19.63■□□□□ 0.73
AP4E1-205ENST00000561393 CASTP20810 708 aaKnown RBP19.62■□□□□ 0.73
AP4E1-205ENST00000561393 TRDNQ13061 729 aa19.62■□□□□ 0.73
AP4E1-205ENST00000561393 STK3Q13188 491 aa19.62■□□□□ 0.73
AP4E1-205ENST00000561393 AXIN2Q9Y2T1 843 aa19.62■□□□□ 0.73
AP4E1-205ENST00000561393 CWC22Q9HCG8 908 aaKnown RBP19.62■□□□□ 0.73
AP4E1-205ENST00000561393 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
AP4E1-205ENST00000561393 MPHOSPH8Q99549 860 aa19.61■□□□□ 0.73
AP4E1-205ENST00000561393 CAVIN1Q6NZI2 390 aaKnown RBP19.61■□□□□ 0.73
AP4E1-205ENST00000561393 BICDL1Q6ZP65 573 aa19.61■□□□□ 0.73
AP4E1-205ENST00000561393 RALYLQ86SE5 291 aaKnown RBP19.61■□□□□ 0.73
AP4E1-205ENST00000561393 NGLY1Q96IV0 654 aa19.61■□□□□ 0.73
AP4E1-205ENST00000561393 KLHDC4Q8TBB5 520 aa19.61■□□□□ 0.73
AP4E1-205ENST00000561393 BICC1Q9H694 974 aaKnown RBP19.61■□□□□ 0.73
AP4E1-205ENST00000561393 TRMT112Q9UI30 125 aaKnown RBP19.61■□□□□ 0.73
AP4E1-205ENST00000561393 ERBB3P21860 1342 aa19.61■□□□□ 0.73
AP4E1-205ENST00000561393 PRAMEF22A3QJZ6 481 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 ESYT1Q9BSJ8 1104 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 CPLX1O14810 134 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 TECPR2O15040 1411 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 PHKG2P15735 406 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 BLOC1S2Q6QNY1 142 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 METTL24Q5JXM2 366 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 ACSBG1Q96GR2 724 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 SSFA2P28290 1259 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
AP4E1-205ENST00000561393 ISY1Q9ULR0 285 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms