RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PLA2G4EQ3MJ16 856 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 Q6ZVU0 165 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 SH3BP5LQ7L8J4 393 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 HELBQ8NG08 1087 aaPredicted RBP5.49□□□□□ -1.53
SPG11-225ENST00000561391 SLC10A4Q96EP9 437 aa5.49□□□□□ -1.53
SPG11-225ENST00000561391 INSM2Q96T92 566 aaPredicted RBP5.49□□□□□ -1.53
SPG11-225ENST00000561391 PLA2R1Q13018 1463 aa5.48□□□□□ -1.53
SPG11-225ENST00000561391 K7ELQ4 463 aaPredicted RBP5.48□□□□□ -1.53
SPG11-225ENST00000561391 LILRB3O75022 631 aa5.48□□□□□ -1.53
SPG11-225ENST00000561391 CELA2BP08218 269 aaPredicted RBP5.48□□□□□ -1.53
SPG11-225ENST00000561391 ERFEQ4G0M1 354 aa5.48□□□□□ -1.53
SPG11-225ENST00000561391 AGBL1Q96MI9 1066 aa5.48□□□□□ -1.53
SPG11-225ENST00000561391 SPOCK3Q9BQ16 436 aa5.48□□□□□ -1.53
SPG11-225ENST00000561391 SUPT6HQ7KZ85 1726 aaKnown RBP5.48□□□□□ -1.53
SPG11-225ENST00000561391 SENP3-EIF4A1A0A087X0R7 540 aa5.47□□□□□ -1.53
SPG11-225ENST00000561391 TUSC1Q2TAM9 212 aa5.47□□□□□ -1.53
SPG11-225ENST00000561391 ANKLE2Q86XL3 938 aa5.47□□□□□ -1.53
SPG11-225ENST00000561391 NEDD1Q8NHV4 660 aa5.47□□□□□ -1.53
SPG11-225ENST00000561391 GPKOWQ92917 476 aaPredicted RBP eCLIP5.47□□□□□ -1.53
SPG11-225ENST00000561391 LRRC7Q96NW7 1537 aa5.47□□□□□ -1.53
SPG11-225ENST00000561391 FLIIQ13045 1269 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 PPP2R2DQ66LE6 453 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 RNF217Q8TC41 542 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 DCAF5Q96JK2 942 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 KCTD15Q96SI1 283 aaPredicted RBP5.46□□□□□ -1.54
SPG11-225ENST00000561391 ARHGAP9Q9BRR9 750 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 CDV3Q9UKY7 258 aaKnown RBP5.46□□□□□ -1.54
SPG11-225ENST00000561391 NPATQ14207 1427 aa5.46□□□□□ -1.54
SPG11-225ENST00000561391 CTDSPL2Q05D32 466 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 TMEM259Q4ZIN3 620 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 EFCAB2Q5VUJ9 269 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 ERICH6Q7L0X2 663 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 BEND7Q8N7W2 519 aaPredicted RBP5.45□□□□□ -1.54
SPG11-225ENST00000561391 ZNF395Q9H8N7 513 aaPredicted RBP5.45□□□□□ -1.54
SPG11-225ENST00000561391 SNRKQ9NRH2 765 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 CNTNAP5Q8WYK1 1306 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 GOLGA3Q08378 1498 aa5.45□□□□□ -1.54
SPG11-225ENST00000561391 FAM135BQ49AJ0 1406 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 FOXR1Q6PIV2 292 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 ZBTB33Q86T24 672 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 VWDEQ8N2E2 1590 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 MBIPQ9NS73 344 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 CNTLNQ9NXG0 1405 aa5.44□□□□□ -1.54
SPG11-225ENST00000561391 CFAP74Q9C0B2 1584 aa5.43□□□□□ -1.54
SPG11-225ENST00000561391 CEP170BQ9Y4F5 1589 aaPredicted RBP5.43□□□□□ -1.54
SPG11-225ENST00000561391 UBTFP17480 764 aaKnown RBP5.43□□□□□ -1.54
SPG11-225ENST00000561391 GAS6Q14393 721 aa5.43□□□□□ -1.54
SPG11-225ENST00000561391 INTS6LQ5JSJ4 861 aaKnown RBP5.43□□□□□ -1.54
SPG11-225ENST00000561391 QTRT2Q9H974 415 aaKnown RBP5.43□□□□□ -1.54
SPG11-225ENST00000561391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.43□□□□□ -1.54
SPG11-225ENST00000561391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.42□□□□□ -1.54
SPG11-225ENST00000561391 JCADQ9P266 1359 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 PROCP04070 461 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 USP17L8P0C7I0 530 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 RAB15P59190 212 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 MCM6Q14566 821 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 GGT6Q6P531 493 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 LYSMD3Q7Z3D4 306 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 BANK1Q8NDB2 785 aa5.42□□□□□ -1.54
SPG11-225ENST00000561391 MYO3AQ8NEV4 1616 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 NPHP4O75161 1426 aaPredicted RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 GPR25O00155 361 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 ADH1AP07327 375 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 BCRP11274 1271 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 RBM6P78332 1123 aaKnown RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 NBPF20Q3BBV1 942 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 FOXD4L5Q5VV16 416 aaPredicted RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 PDXDC2PQ6P474 469 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 THEMISQ8N1K5 641 aaPredicted RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 LRRN4Q8WUT4 740 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 CLUAP1Q96AJ1 413 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 ZMYND15Q9H091 742 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 CUEDC1Q9NWM3 386 aaPredicted RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 AGLP35573 1532 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 AFF2P51816 1311 aa5.41□□□□□ -1.54
SPG11-225ENST00000561391 RNF17Q9BXT8 1623 aaKnown RBP5.41□□□□□ -1.54
SPG11-225ENST00000561391 PLCH2O75038 1416 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 STRCP1A6NGW2 1772 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 RAD21O60216 631 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 RHOQP17081 205 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 RIPOR1Q6ZS17 1223 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 PRICKLE2Q7Z3G6 844 aa5.4□□□□□ -1.54
SPG11-225ENST00000561391 ZNF784Q8NCA9 323 aaPredicted RBP5.4□□□□□ -1.54
SPG11-225ENST00000561391 ZNF837Q96EG3 531 aaPredicted RBP5.4□□□□□ -1.54
SPG11-225ENST00000561391 NEURL4Q96JN8 1562 aa5.4□□□□□ -1.55
SPG11-225ENST00000561391 DNMT1P26358 1616 aaKnown RBP5.4□□□□□ -1.55
SPG11-225ENST00000561391 ATAD2Q6PL18 1390 aa5.4□□□□□ -1.55
SPG11-225ENST00000561391 A2ML1A8K2U0 1454 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 CDK12Q9NYV4 1490 aaPredicted RBP5.39□□□□□ -1.55
SPG11-225ENST00000561391 DIP2CQ9Y2E4 1556 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 LRP6O75581 1613 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 SUPT5HO00267 1087 aaKnown RBP5.39□□□□□ -1.55
SPG11-225ENST00000561391 ITGB2P05107 769 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 RANGAP1P46060 587 aaPredicted RBP5.39□□□□□ -1.55
SPG11-225ENST00000561391 MTMR14Q8NCE2 650 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 POM121Q96HA1 1249 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 TRERF1Q96PN7 1200 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 HMX1Q9NP08 348 aaPredicted RBP5.39□□□□□ -1.55
SPG11-225ENST00000561391 TMPRSS4Q9NRS4 437 aa5.39□□□□□ -1.55
SPG11-225ENST00000561391 FKBPLQ9UIM3 349 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms