RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 A1BGP04217 495 aa18.31■□□□□ 0.52
TPM1-230ENST00000561266 FLAD1Q8NFF5 587 aa18.31■□□□□ 0.52
TPM1-230ENST00000561266 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
TPM1-230ENST00000561266 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
TPM1-230ENST00000561266 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
TPM1-230ENST00000561266 SRP68Q9UHB9 627 aaKnown RBP18.3■□□□□ 0.52
TPM1-230ENST00000561266 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
TPM1-230ENST00000561266 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
TPM1-230ENST00000561266 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
TPM1-230ENST00000561266 ARXQ96QS3 562 aa18.28■□□□□ 0.52
TPM1-230ENST00000561266 PPP1R1BQ9UD71 204 aaPredicted RBP18.28■□□□□ 0.52
TPM1-230ENST00000561266 GYS1P13807 737 aa18.27■□□□□ 0.52
TPM1-230ENST00000561266 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
TPM1-230ENST00000561266 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
TPM1-230ENST00000561266 ADRA2BP18089 450 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
TPM1-230ENST00000561266 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
TPM1-230ENST00000561266 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
TPM1-230ENST00000561266 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
TPM1-230ENST00000561266 CHL1O00533 1208 aa18.25■□□□□ 0.51
TPM1-230ENST00000561266 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
TPM1-230ENST00000561266 STARD3NLO95772 234 aa18.25■□□□□ 0.51
TPM1-230ENST00000561266 RFC4P35249 363 aa18.25■□□□□ 0.51
TPM1-230ENST00000561266 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
TPM1-230ENST00000561266 COL15A1P39059 1388 aa18.25■□□□□ 0.51
TPM1-230ENST00000561266 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
TPM1-230ENST00000561266 FKBP8Q14318 412 aa18.24■□□□□ 0.51
TPM1-230ENST00000561266 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
TPM1-230ENST00000561266 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
TPM1-230ENST00000561266 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
TPM1-230ENST00000561266 POLD1P28340 1107 aa18.23■□□□□ 0.51
TPM1-230ENST00000561266 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
TPM1-230ENST00000561266 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
TPM1-230ENST00000561266 MMP10P09238 476 aa18.21■□□□□ 0.51
TPM1-230ENST00000561266 NLGN2Q8NFZ4 835 aa18.21■□□□□ 0.51
TPM1-230ENST00000561266 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
TPM1-230ENST00000561266 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
TPM1-230ENST00000561266 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
TPM1-230ENST00000561266 DDR1Q08345 913 aa18.2■□□□□ 0.5
TPM1-230ENST00000561266 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
TPM1-230ENST00000561266 ZNF330Q9Y3S2 320 aaPredicted RBP18.2■□□□□ 0.5
TPM1-230ENST00000561266 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
TPM1-230ENST00000561266 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
TPM1-230ENST00000561266 IL6STP40189 918 aaPredicted RBP18.19■□□□□ 0.5
TPM1-230ENST00000561266 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
TPM1-230ENST00000561266 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
TPM1-230ENST00000561266 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
TPM1-230ENST00000561266 CFAP44Q96MT7 982 aa18.19■□□□□ 0.5
TPM1-230ENST00000561266 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
TPM1-230ENST00000561266 AFDNP55196 1824 aaKnown RBP18.19■□□□□ 0.5
TPM1-230ENST00000561266 TM4SF1P30408 202 aa18.18■□□□□ 0.5
TPM1-230ENST00000561266 MIER1Q8N108 512 aa18.18■□□□□ 0.5
TPM1-230ENST00000561266 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
TPM1-230ENST00000561266 KIF13BQ9NQT8 1826 aa18.17■□□□□ 0.5
TPM1-230ENST00000561266 ZPR1O75312 459 aa18.17■□□□□ 0.5
TPM1-230ENST00000561266 PDIA6Q15084 440 aa18.17■□□□□ 0.5
TPM1-230ENST00000561266 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
TPM1-230ENST00000561266 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 ANXA1P04083 346 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
TPM1-230ENST00000561266 NFIXQ14938 502 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 PROSER3Q2NL68 480 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 NECTIN2Q92692 538 aa18.16■□□□□ 0.5
TPM1-230ENST00000561266 CCER2I3L3R5 266 aa18.15■□□□□ 0.5
TPM1-230ENST00000561266 POLRMTO00411 1230 aaKnown RBP18.15■□□□□ 0.5
TPM1-230ENST00000561266 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
TPM1-230ENST00000561266 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
TPM1-230ENST00000561266 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
TPM1-230ENST00000561266 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.5
TPM1-230ENST00000561266 A0A087WZG4 1122 aa18.14■□□□□ 0.49
TPM1-230ENST00000561266 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
TPM1-230ENST00000561266 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
TPM1-230ENST00000561266 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
TPM1-230ENST00000561266 MYL6BP14649 208 aa18.13■□□□□ 0.49
TPM1-230ENST00000561266 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
TPM1-230ENST00000561266 C8orf58Q8NAV2 365 aa18.13■□□□□ 0.49
TPM1-230ENST00000561266 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
TPM1-230ENST00000561266 NUP98P52948 1817 aa18.13■□□□□ 0.49
TPM1-230ENST00000561266 GNAI1P63096 354 aa18.12■□□□□ 0.49
TPM1-230ENST00000561266 HLFQ16534 295 aa18.12■□□□□ 0.49
TPM1-230ENST00000561266 DUSP27Q5VZP5 1158 aa18.12■□□□□ 0.49
TPM1-230ENST00000561266 BICDL1Q6ZP65 573 aa18.12■□□□□ 0.49
TPM1-230ENST00000561266 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
TPM1-230ENST00000561266 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
TPM1-230ENST00000561266 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
TPM1-230ENST00000561266 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
TPM1-230ENST00000561266 PARP3Q9Y6F1 533 aa18.11■□□□□ 0.49
TPM1-230ENST00000561266 C10orf71Q711Q0 1435 aa18.11■□□□□ 0.49
TPM1-230ENST00000561266 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
TPM1-230ENST00000561266 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
TPM1-230ENST00000561266 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
TPM1-230ENST00000561266 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.49
TPM1-230ENST00000561266 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1007.4 ms