RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
SHF-210ENST00000561239 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
SHF-210ENST00000561239 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
SHF-210ENST00000561239 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
SHF-210ENST00000561239 ZNF496Q96IT1 587 aaPredicted RBP17.81■□□□□ 0.44
SHF-210ENST00000561239 APAF1O14727 1248 aa17.8■□□□□ 0.44
SHF-210ENST00000561239 LMOD3Q0VAK6 560 aa17.8■□□□□ 0.44
SHF-210ENST00000561239 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
SHF-210ENST00000561239 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
SHF-210ENST00000561239 ZPR1O75312 459 aa17.79■□□□□ 0.44
SHF-210ENST00000561239 THUMPD2Q9BTF0 503 aaKnown RBP17.79■□□□□ 0.44
SHF-210ENST00000561239 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
SHF-210ENST00000561239 SOS1Q07889 1333 aaPredicted RBP17.78■□□□□ 0.44
SHF-210ENST00000561239 MMP10P09238 476 aa17.78■□□□□ 0.44
SHF-210ENST00000561239 GYS1P13807 737 aa17.78■□□□□ 0.44
SHF-210ENST00000561239 NPM2Q86SE8 214 aaKnown RBP17.78■□□□□ 0.44
SHF-210ENST00000561239 A0A087WZG4 1122 aa17.77■□□□□ 0.44
SHF-210ENST00000561239 MIER1Q8N108 512 aa17.77■□□□□ 0.44
SHF-210ENST00000561239 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
SHF-210ENST00000561239 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
SHF-210ENST00000561239 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
SHF-210ENST00000561239 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
SHF-210ENST00000561239 KCNQ3O43525 872 aa17.76■□□□□ 0.43
SHF-210ENST00000561239 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
SHF-210ENST00000561239 GPR162Q16538 588 aa17.76■□□□□ 0.43
SHF-210ENST00000561239 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
SHF-210ENST00000561239 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
SHF-210ENST00000561239 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
SHF-210ENST00000561239 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
SHF-210ENST00000561239 COL15A1P39059 1388 aa17.75■□□□□ 0.43
SHF-210ENST00000561239 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
SHF-210ENST00000561239 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
SHF-210ENST00000561239 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
SHF-210ENST00000561239 C4AP0C0L4 1744 aa17.73■□□□□ 0.43
SHF-210ENST00000561239 IL6STP40189 918 aaPredicted RBP17.73■□□□□ 0.43
SHF-210ENST00000561239 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
SHF-210ENST00000561239 SRP68Q9UHB9 627 aaKnown RBP17.73■□□□□ 0.43
SHF-210ENST00000561239 CHL1O00533 1208 aa17.72■□□□□ 0.43
SHF-210ENST00000561239 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
SHF-210ENST00000561239 USPL1Q5W0Q7 1092 aa17.72■□□□□ 0.43
SHF-210ENST00000561239 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
SHF-210ENST00000561239 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
SHF-210ENST00000561239 TGFB2P61812 414 aa17.71■□□□□ 0.43
SHF-210ENST00000561239 FKBP8Q14318 412 aa17.71■□□□□ 0.43
SHF-210ENST00000561239 PELP1Q8IZL8 1130 aaKnown RBP17.71■□□□□ 0.43
SHF-210ENST00000561239 A1BGP04217 495 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 YY1P25490 414 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 EIF4A1P60842 406 aaKnown RBP17.69■□□□□ 0.42
SHF-210ENST00000561239 WWC1Q8IX03 1113 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
SHF-210ENST00000561239 USP16Q9Y5T5 823 aa17.69■□□□□ 0.42
SHF-210ENST00000561239 TM4SF1P30408 202 aa17.68■□□□□ 0.42
SHF-210ENST00000561239 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
SHF-210ENST00000561239 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
SHF-210ENST00000561239 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
SHF-210ENST00000561239 POLRMTO00411 1230 aaKnown RBP17.66■□□□□ 0.42
SHF-210ENST00000561239 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
SHF-210ENST00000561239 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
SHF-210ENST00000561239 IL16Q14005 1332 aa17.66■□□□□ 0.42
SHF-210ENST00000561239 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
SHF-210ENST00000561239 NFIXQ14938 502 aa17.65■□□□□ 0.42
SHF-210ENST00000561239 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
SHF-210ENST00000561239 ZNF652Q9Y2D9 606 aa17.65■□□□□ 0.42
SHF-210ENST00000561239 LAMB4A4D0S4 1761 aa17.64■□□□□ 0.41
SHF-210ENST00000561239 RGL2O15211 777 aa17.64■□□□□ 0.41
SHF-210ENST00000561239 DDR1Q08345 913 aa17.64■□□□□ 0.41
SHF-210ENST00000561239 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
SHF-210ENST00000561239 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
SHF-210ENST00000561239 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
SHF-210ENST00000561239 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
SHF-210ENST00000561239 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
SHF-210ENST00000561239 GNAI1P63096 354 aa17.63■□□□□ 0.41
SHF-210ENST00000561239 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
SHF-210ENST00000561239 UTRNP46939 3433 aa17.63■□□□□ 0.41
SHF-210ENST00000561239 SERPINB2P05120 415 aa17.62■□□□□ 0.41
SHF-210ENST00000561239 YBX3P16989 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHF-210ENST00000561239 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
SHF-210ENST00000561239 ERBB4Q15303 1308 aa17.62■□□□□ 0.41
SHF-210ENST00000561239 CAMTA2O94983 1202 aa17.61■□□□□ 0.41
SHF-210ENST00000561239 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
SHF-210ENST00000561239 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
SHF-210ENST00000561239 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
SHF-210ENST00000561239 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
SHF-210ENST00000561239 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
SHF-210ENST00000561239 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
SHF-210ENST00000561239 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
SHF-210ENST00000561239 CHD4Q14839 1912 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 SCN7AQ01118 1682 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 NBPF26B4DH59 902 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 NPHP1O15259 732 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 HOXB7P09629 217 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 DPEP1P16444 411 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
SHF-210ENST00000561239 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 NBPF10Q6P3W6 841 aaKnown RBP17.59■□□□□ 0.41
SHF-210ENST00000561239 NBPF15Q8N660 670 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 PIM2Q9P1W9 311 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms