RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 ARXQ96QS3 562 aa11.84□□□□□ -0.51
SNRPA1-214ENST00000560987 CEMIPQ8WUJ3 1361 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 PTGER2P43116 358 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 SYT17Q9BSW7 474 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 C5P01031 1676 aa11.83□□□□□ -0.52
SNRPA1-214ENST00000560987 CYP19A1P11511 503 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-214ENST00000560987 SSFA2P28290 1259 aa11.82□□□□□ -0.52
SNRPA1-214ENST00000560987 FHDC1Q9C0D6 1143 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-214ENST00000560987 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
SNRPA1-214ENST00000560987 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-214ENST00000560987 C4BP0C0L5 1744 aa11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 SNRPA1P09661 255 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
SNRPA1-214ENST00000560987 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 DLG5Q8TDM6 1919 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 ZPR1O75312 459 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 A1BGP04217 495 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
SNRPA1-214ENST00000560987 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-214ENST00000560987 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
SNRPA1-214ENST00000560987 MRC1P22897 1456 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 GPR162Q16538 588 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
SNRPA1-214ENST00000560987 A0A087WZG4 1122 aa11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 EIF2S2P20042 333 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 EIF4A1P60842 406 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 SRP68Q9UHB9 627 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 CASZ1Q86V15 1759 aa11.77□□□□□ -0.53
SNRPA1-214ENST00000560987 PIP4K2AP48426 406 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-214ENST00000560987 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
SNRPA1-214ENST00000560987 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
SNRPA1-214ENST00000560987 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
SNRPA1-214ENST00000560987 KCPQ6ZWJ8 1503 aa11.76□□□□□ -0.53
SNRPA1-214ENST00000560987 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 CHL1O00533 1208 aa11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
SNRPA1-214ENST00000560987 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 UBR3Q6ZT12 1888 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 MYH14Q7Z406 1995 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 MMP10P09238 476 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 GYS1P13807 737 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 GNAI1P63096 354 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-214ENST00000560987 MYL6BP14649 208 aa11.73□□□□□ -0.53
SNRPA1-214ENST00000560987 TJP1Q07157 1748 aa11.73□□□□□ -0.53
SNRPA1-214ENST00000560987 FKBP8Q14318 412 aa11.73□□□□□ -0.53
SNRPA1-214ENST00000560987 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
SNRPA1-214ENST00000560987 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-214ENST00000560987 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 COL15A1P39059 1388 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 MIER1Q8N108 512 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
SNRPA1-214ENST00000560987 ELL2O00472 640 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-214ENST00000560987 NPHP1O15259 732 aa11.71□□□□□ -0.53
SNRPA1-214ENST00000560987 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
SNRPA1-214ENST00000560987 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
SNRPA1-214ENST00000560987 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
SNRPA1-214ENST00000560987 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
SNRPA1-214ENST00000560987 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-214ENST00000560987 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
SNRPA1-214ENST00000560987 TM4SF1P30408 202 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 EVX2Q03828 476 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 CCDC27Q2M243 656 aa11.69□□□□□ -0.54
SNRPA1-214ENST00000560987 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms