RNA–Protein interactions for RNA: ENST00000560726.5

ETFA-216, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3 BASIC

Gene ETFA, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-216ENST00000560726 SRP68Q9UHB9 627 aaKnown RBP24.66■■□□□ 1.54
ETFA-216ENST00000560726 ZBTB1Q9Y2K1 713 aa24.66■■□□□ 1.54
ETFA-216ENST00000560726 SOS1Q07889 1333 aaPredicted RBP24.65■■□□□ 1.54
ETFA-216ENST00000560726 DCAF8L1A6NGE4 600 aa24.65■■□□□ 1.54
ETFA-216ENST00000560726 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
ETFA-216ENST00000560726 MMP10P09238 476 aa24.64■■□□□ 1.54
ETFA-216ENST00000560726 NLGN1Q8N2Q7 840 aa24.63■■□□□ 1.53
ETFA-216ENST00000560726 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
ETFA-216ENST00000560726 GOLGB1Q14789 3259 aaKnown RBP24.63■■□□□ 1.53
ETFA-216ENST00000560726 USP42Q9H9J4 1324 aaKnown RBP24.62■■□□□ 1.53
ETFA-216ENST00000560726 STARD3NLO95772 234 aa24.62■■□□□ 1.53
ETFA-216ENST00000560726 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
ETFA-216ENST00000560726 MIS18AQ9NYP9 233 aa24.62■■□□□ 1.53
ETFA-216ENST00000560726 CANXP27824 592 aaKnown RBP24.61■■□□□ 1.53
ETFA-216ENST00000560726 CCDC146Q8IYE0 955 aa24.61■■□□□ 1.53
ETFA-216ENST00000560726 CD2APQ9Y5K6 639 aa24.61■■□□□ 1.53
ETFA-216ENST00000560726 FKBP8Q14318 412 aa24.6■■□□□ 1.53
ETFA-216ENST00000560726 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
ETFA-216ENST00000560726 COL15A1P39059 1388 aa24.59■■□□□ 1.53
ETFA-216ENST00000560726 PRAMEF22A3QJZ6 481 aa24.59■■□□□ 1.53
ETFA-216ENST00000560726 RUNDC1Q96C34 613 aa24.59■■□□□ 1.53
ETFA-216ENST00000560726 A1BGP04217 495 aa24.58■■□□□ 1.53
ETFA-216ENST00000560726 TMPOP42166 694 aaKnown RBP24.58■■□□□ 1.53
ETFA-216ENST00000560726 RIPK4P57078 832 aa24.58■■□□□ 1.53
ETFA-216ENST00000560726 USPL1Q5W0Q7 1092 aa24.58■■□□□ 1.53
ETFA-216ENST00000560726 USP16Q9Y5T5 823 aa24.58■■□□□ 1.53
ETFA-216ENST00000560726 ZPR1O75312 459 aa24.56■■□□□ 1.52
ETFA-216ENST00000560726 EIF5P55010 431 aaKnown RBP24.56■■□□□ 1.52
ETFA-216ENST00000560726 GPR162Q16538 588 aa24.56■■□□□ 1.52
ETFA-216ENST00000560726 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
ETFA-216ENST00000560726 RRP7AQ9Y3A4 280 aaKnown RBP24.56■■□□□ 1.52
ETFA-216ENST00000560726 SNRPA1P09661 255 aaKnown RBP24.55■■□□□ 1.52
ETFA-216ENST00000560726 NARFQ9UHQ1 456 aa24.55■■□□□ 1.52
ETFA-216ENST00000560726 BCL2L12Q9HB09 334 aa24.54■■□□□ 1.52
ETFA-216ENST00000560726 KDM3BQ7LBC6 1761 aa24.53■■□□□ 1.52
ETFA-216ENST00000560726 DDR1Q08345 913 aa24.53■■□□□ 1.52
ETFA-216ENST00000560726 PARP3Q9Y6F1 533 aa24.53■■□□□ 1.52
ETFA-216ENST00000560726 YBX3P16989 372 aaKnown RBP eCLIP24.52■■□□□ 1.522e-8■□□□□ 8.9
ETFA-216ENST00000560726 TM4SF1P30408 202 aa24.52■■□□□ 1.52
ETFA-216ENST00000560726 PIP4K2AP48426 406 aaPredicted RBP24.52■■□□□ 1.52
ETFA-216ENST00000560726 NEUROD2Q15784 382 aa24.52■■□□□ 1.52
ETFA-216ENST00000560726 ZNF330Q9Y3S2 320 aaPredicted RBP24.52■■□□□ 1.52
ETFA-216ENST00000560726 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
ETFA-216ENST00000560726 FAM9BQ8IZU0 186 aa24.51■■□□□ 1.51
ETFA-216ENST00000560726 KIF13BQ9NQT8 1826 aa24.5■■□□□ 1.51
ETFA-216ENST00000560726 YY1P25490 414 aa24.5■■□□□ 1.51
ETFA-216ENST00000560726 C10orf71Q711Q0 1435 aa24.5■■□□□ 1.51
ETFA-216ENST00000560726 A0A087WZG4 1122 aa24.49■■□□□ 1.51
ETFA-216ENST00000560726 POLRMTO00411 1230 aaKnown RBP24.49■■□□□ 1.51
ETFA-216ENST00000560726 EIF4A1P60842 406 aaKnown RBP24.49■■□□□ 1.51
ETFA-216ENST00000560726 WWC3Q9ULE0 1092 aa24.49■■□□□ 1.51
ETFA-216ENST00000560726 TBC1D2BQ9UPU7 963 aa24.49■■□□□ 1.51
ETFA-216ENST00000560726 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
ETFA-216ENST00000560726 NFIXQ14938 502 aa24.48■■□□□ 1.51
ETFA-216ENST00000560726 TRIM35Q9UPQ4 493 aa24.48■■□□□ 1.51
ETFA-216ENST00000560726 APAF1O14727 1248 aa24.47■■□□□ 1.51
ETFA-216ENST00000560726 KIAA1551Q9HCM1 1747 aa24.47■■□□□ 1.51
ETFA-216ENST00000560726 PXDNLA1KZ92 1463 aa24.46■■□□□ 1.51
ETFA-216ENST00000560726 NBPF26B4DH59 902 aa24.46■■□□□ 1.51
ETFA-216ENST00000560726 GIGYF1O75420 1035 aaPredicted RBP24.46■■□□□ 1.51
ETFA-216ENST00000560726 NCBP3Q53F19 620 aaKnown RBP24.46■■□□□ 1.51
ETFA-216ENST00000560726 NBPF10Q6P3W6 841 aaKnown RBP24.46■■□□□ 1.51
ETFA-216ENST00000560726 NBPF15Q8N660 670 aa24.46■■□□□ 1.51
ETFA-216ENST00000560726 TSPYL4Q9UJ04 414 aa24.46■■□□□ 1.51
ETFA-216ENST00000560726 N4BP2Q86UW6 1770 aaPredicted RBP24.44■■□□□ 1.5
ETFA-216ENST00000560726 A0A0G2JLW4 131 aa24.44■■□□□ 1.5
ETFA-216ENST00000560726 TGFB2P61812 414 aa24.44■■□□□ 1.5
ETFA-216ENST00000560726 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
ETFA-216ENST00000560726 SCN7AQ01118 1682 aa24.43■■□□□ 1.5
ETFA-216ENST00000560726 CAMTA2O94983 1202 aa24.43■■□□□ 1.5
ETFA-216ENST00000560726 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
ETFA-216ENST00000560726 DZIP3Q86Y13 1208 aaKnown RBP24.43■■□□□ 1.5
ETFA-216ENST00000560726 CHD4Q14839 1912 aa24.42■■□□□ 1.5
ETFA-216ENST00000560726 TBC1D9BQ66K14 1250 aa24.42■■□□□ 1.5
ETFA-216ENST00000560726 BICDL1Q6ZP65 573 aa24.42■■□□□ 1.5
ETFA-216ENST00000560726 AFDNP55196 1824 aaKnown RBP24.42■■□□□ 1.5
ETFA-216ENST00000560726 GRIN3BO60391 1043 aa24.41■■□□□ 1.5
ETFA-216ENST00000560726 DPEP1P16444 411 aa24.41■■□□□ 1.5
ETFA-216ENST00000560726 BABAM1Q9NWV8 329 aa24.41■■□□□ 1.5
ETFA-216ENST00000560726 SERPINB2P05120 415 aa24.4■■□□□ 1.5
ETFA-216ENST00000560726 NRXN2Q9P2S2 1712 aa24.4■■□□□ 1.5
ETFA-216ENST00000560726 CCDC27Q2M243 656 aa24.39■■□□□ 1.49
ETFA-216ENST00000560726 BCORQ6W2J9 1755 aa24.39■■□□□ 1.49
ETFA-216ENST00000560726 CHL1O00533 1208 aa24.38■■□□□ 1.49
ETFA-216ENST00000560726 KCNA3P22001 575 aa24.38■■□□□ 1.49
ETFA-216ENST00000560726 LAS1LQ9Y4W2 734 aaKnown RBP24.38■■□□□ 1.49
ETFA-216ENST00000560726 NGEFQ8N5V2 710 aa24.37■■□□□ 1.49
ETFA-216ENST00000560726 CHRNA5P30532 468 aa24.36■■□□□ 1.49
ETFA-216ENST00000560726 CARMIL3Q8ND23 1372 aa24.35■■□□□ 1.49
ETFA-216ENST00000560726 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
ETFA-216ENST00000560726 BRCA1P38398 1863 aaKnown RBP24.34■■□□□ 1.49
ETFA-216ENST00000560726 MYL6BP14649 208 aa24.34■■□□□ 1.49
ETFA-216ENST00000560726 BCS1LQ9Y276 419 aa24.34■■□□□ 1.49
ETFA-216ENST00000560726 EIF2S2P20042 333 aaKnown RBP24.33■■□□□ 1.49
ETFA-216ENST00000560726 SETDB2Q96T68 719 aa24.33■■□□□ 1.49
ETFA-216ENST00000560726 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
ETFA-216ENST00000560726 HLFQ16534 295 aa24.32■■□□□ 1.48
ETFA-216ENST00000560726 CLEC4GQ6UXB4 293 aa24.32■■□□□ 1.48
ETFA-216ENST00000560726 CCDC24Q8N4L8 307 aa24.32■■□□□ 1.48
ETFA-216ENST00000560726 PDIA6Q15084 440 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms