RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
RMDN3-209ENST00000560588 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
RMDN3-209ENST00000560588 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
RMDN3-209ENST00000560588 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
RMDN3-209ENST00000560588 PPP1R42Q7Z4L9 355 aa12.62□□□□□ -0.39
RMDN3-209ENST00000560588 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
RMDN3-209ENST00000560588 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
RMDN3-209ENST00000560588 MTX1Q13505 466 aa12.62□□□□□ -0.39
RMDN3-209ENST00000560588 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
RMDN3-209ENST00000560588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.39
RMDN3-209ENST00000560588 PXDNQ92626 1479 aa12.62□□□□□ -0.39
RMDN3-209ENST00000560588 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 CHMLP26374 656 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 ERC1Q8IUD2 1116 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 USP42Q9H9J4 1324 aaKnown RBP12.61□□□□□ -0.39
RMDN3-209ENST00000560588 ADCY9O60503 1353 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
RMDN3-209ENST00000560588 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
RMDN3-209ENST00000560588 ATF3P18847 181 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
RMDN3-209ENST00000560588 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 TTC41PQ6P2S7 1318 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 BRPF3Q9ULD4 1205 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 SPG7Q9UQ90 795 aa12.6□□□□□ -0.39
RMDN3-209ENST00000560588 ERBB3P21860 1342 aa12.59□□□□□ -0.39
RMDN3-209ENST00000560588 KCNQ3O43525 872 aa12.59□□□□□ -0.39
RMDN3-209ENST00000560588 MRE11P49959 708 aa12.59□□□□□ -0.39
RMDN3-209ENST00000560588 AEBP2Q6ZN18 517 aaPredicted RBP12.59□□□□□ -0.39
RMDN3-209ENST00000560588 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
RMDN3-209ENST00000560588 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
RMDN3-209ENST00000560588 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.39
RMDN3-209ENST00000560588 RILPL2Q969X0 211 aa12.58□□□□□ -0.39
RMDN3-209ENST00000560588 GPATCH3Q96I76 525 aa12.58□□□□□ -0.39
RMDN3-209ENST00000560588 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
RMDN3-209ENST00000560588 CNTROBQ8N137 903 aa12.58□□□□□ -0.4
RMDN3-209ENST00000560588 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
RMDN3-209ENST00000560588 CRYBG1Q9Y4K1 1723 aa12.58□□□□□ -0.4
RMDN3-209ENST00000560588 COL18A1P39060 1754 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 CYP2E1P05181 493 aaPredicted RBP12.57□□□□□ -0.4
RMDN3-209ENST00000560588 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 UTYO14607 1347 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
RMDN3-209ENST00000560588 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
RMDN3-209ENST00000560588 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
RMDN3-209ENST00000560588 SSFA2P28290 1259 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
RMDN3-209ENST00000560588 MRC1P22897 1456 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
RMDN3-209ENST00000560588 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 PI4K2BQ8TCG2 481 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
RMDN3-209ENST00000560588 ANO2Q9NQ90 1003 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 TNS3Q68CZ2 1445 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
RMDN3-209ENST00000560588 CLASRPQ8N2M8 674 aaKnown RBP12.56□□□□□ -0.4
RMDN3-209ENST00000560588 FAM43AQ8N2R8 423 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 IL1RAPL2Q9NP60 686 aa12.56□□□□□ -0.4
RMDN3-209ENST00000560588 TMEM94Q12767 1356 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 PKD1L3Q7Z443 1732 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 NEK4P51957 841 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 CUL4AQ13619 759 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
RMDN3-209ENST00000560588 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 GZF1Q9H116 711 aaPredicted RBP12.54□□□□□ -0.4
RMDN3-209ENST00000560588 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 CPDO75976 1380 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 GRM8O00222 908 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 PHKG2P15735 406 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 HSPA4P34932 840 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
RMDN3-209ENST00000560588 PARP4Q9UKK3 1724 aaKnown RBP12.53□□□□□ -0.4
RMDN3-209ENST00000560588 SGSM2O43147 1006 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 KIAA1211Q6ZU35 1233 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
RMDN3-209ENST00000560588 RAD50Q92878 1312 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 HIP1O00291 1037 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 XRCC6P12956 609 aaKnown RBP eCLIP12.53□□□□□ -0.4
RMDN3-209ENST00000560588 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
RMDN3-209ENST00000560588 TMX3Q96JJ7 454 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 ECHDC1Q9NTX5 307 aa12.53□□□□□ -0.4
RMDN3-209ENST00000560588 ANXA1P04083 346 aa12.52□□□□□ -0.41
RMDN3-209ENST00000560588 IFIT2P09913 472 aaKnown RBP12.52□□□□□ -0.41
RMDN3-209ENST00000560588 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.41
RMDN3-209ENST00000560588 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms