RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RREB1Q92766 1687 aa10.95□□□□□ -0.66
TRAF3-209ENST00000560463 ABCC4O15439 1325 aa10.95□□□□□ -0.66
TRAF3-209ENST00000560463 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
TRAF3-209ENST00000560463 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
TRAF3-209ENST00000560463 PIGBQ92521 554 aa10.95□□□□□ -0.66
TRAF3-209ENST00000560463 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-209ENST00000560463 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
TRAF3-209ENST00000560463 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
TRAF3-209ENST00000560463 TCERG1O14776 1098 aaKnown RBP10.94□□□□□ -0.66
TRAF3-209ENST00000560463 RLBP1P12271 317 aa10.94□□□□□ -0.66
TRAF3-209ENST00000560463 EIF2S2P20042 333 aaKnown RBP10.94□□□□□ -0.66
TRAF3-209ENST00000560463 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
TRAF3-209ENST00000560463 HYPKQ9NX55 129 aa10.94□□□□□ -0.66
TRAF3-209ENST00000560463 COG6Q9Y2V7 657 aa10.94□□□□□ -0.66
TRAF3-209ENST00000560463 RGS12O14924 1447 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 A0A0G2JS52 829 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 MYT1Q01538 1121 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 FLIIQ13045 1269 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 DDX21Q9NR30 783 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAF3-209ENST00000560463 MYH3P11055 1940 aa10.93□□□□□ -0.66
TRAF3-209ENST00000560463 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
TRAF3-209ENST00000560463 INTS3Q68E01 1043 aaKnown RBP10.92□□□□□ -0.66
TRAF3-209ENST00000560463 TMEM57Q8N5G2 664 aa10.92□□□□□ -0.66
TRAF3-209ENST00000560463 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
TRAF3-209ENST00000560463 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
TRAF3-209ENST00000560463 CHPF2Q9P2E5 772 aa10.92□□□□□ -0.66
TRAF3-209ENST00000560463 TNNQ9UQP3 1299 aa10.92□□□□□ -0.66
TRAF3-209ENST00000560463 CCT4P50991 539 aaKnown RBP10.91□□□□□ -0.66
TRAF3-209ENST00000560463 RBM6P78332 1123 aaKnown RBP10.91□□□□□ -0.66
TRAF3-209ENST00000560463 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
TRAF3-209ENST00000560463 G2E3Q7L622 706 aa10.91□□□□□ -0.66
TRAF3-209ENST00000560463 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
TRAF3-209ENST00000560463 SEPT12Q8IYM1 358 aa10.91□□□□□ -0.66
TRAF3-209ENST00000560463 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
TRAF3-209ENST00000560463 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
TRAF3-209ENST00000560463 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
TRAF3-209ENST00000560463 PRAMEF22A3QJZ6 481 aa10.9□□□□□ -0.66
TRAF3-209ENST00000560463 PTCD1O75127 700 aaKnown RBP10.9□□□□□ -0.66
TRAF3-209ENST00000560463 DDX58O95786 925 aaKnown RBP10.9□□□□□ -0.66
TRAF3-209ENST00000560463 USP16Q9Y5T5 823 aa10.9□□□□□ -0.66
TRAF3-209ENST00000560463 RGPD3A6NKT7 1758 aaPredicted RBP10.9□□□□□ -0.67
TRAF3-209ENST00000560463 RGPD4Q7Z3J3 1758 aa10.9□□□□□ -0.67
TRAF3-209ENST00000560463 PDIA6Q15084 440 aa10.89□□□□□ -0.67
TRAF3-209ENST00000560463 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
TRAF3-209ENST00000560463 PHAXQ9H814 394 aaKnown RBP10.89□□□□□ -0.67
TRAF3-209ENST00000560463 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
TRAF3-209ENST00000560463 ATP10DQ9P241 1426 aa10.89□□□□□ -0.67
TRAF3-209ENST00000560463 ZBTB7BO15156 539 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-209ENST00000560463 STARD3NLO95772 234 aa10.88□□□□□ -0.67
TRAF3-209ENST00000560463 B4GALNT3Q6L9W6 998 aa10.88□□□□□ -0.67
TRAF3-209ENST00000560463 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
TRAF3-209ENST00000560463 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
TRAF3-209ENST00000560463 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
TRAF3-209ENST00000560463 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
TRAF3-209ENST00000560463 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
TRAF3-209ENST00000560463 KRT27Q7Z3Y8 459 aa10.87□□□□□ -0.67
TRAF3-209ENST00000560463 DNAAF4Q8WXU2 420 aa10.87□□□□□ -0.67
TRAF3-209ENST00000560463 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
TRAF3-209ENST00000560463 UBR3Q6ZT12 1888 aa10.87□□□□□ -0.67
TRAF3-209ENST00000560463 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
TRAF3-209ENST00000560463 PI4KAP2A4QPH2 592 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 ANXA1P04083 346 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 MYL6BP14649 208 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 RXRBP28702 533 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 PROSER3Q2NL68 480 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 SLC4A10Q6U841 1118 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 LRP10Q7Z4F1 713 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 PI4KAP1Q8N8J0 262 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 ADCY9O60503 1353 aa10.86□□□□□ -0.67
TRAF3-209ENST00000560463 EP400Q96L91 3159 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 F6X3S4 739 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 KCNQ2O43526 872 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 ADRA2BP18089 450 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 CENPQQ7L2Z9 268 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-209ENST00000560463 DNAJC10Q8IXB1 793 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 PELP1Q8IZL8 1130 aaKnown RBP10.85□□□□□ -0.67
TRAF3-209ENST00000560463 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
TRAF3-209ENST00000560463 RWDD1Q9H446 243 aaPredicted RBP10.85□□□□□ -0.67
TRAF3-209ENST00000560463 C4AP0C0L4 1744 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 ALDH1L1O75891 902 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 A1BGP04217 495 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 GNAI3P08754 354 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-209ENST00000560463 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
TRAF3-209ENST00000560463 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 SIK1P57059 783 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 NEXNQ0ZGT2 675 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 NBPF14Q5TI25 921 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 NBPF10Q6P3W6 841 aaKnown RBP10.84□□□□□ -0.67
TRAF3-209ENST00000560463 COPS6Q7L5N1 327 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 NBPF15Q8N660 670 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 XAGE3Q8WTP9 111 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms