RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
CRTC3-209ENST00000560320 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
CRTC3-209ENST00000560320 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
CRTC3-209ENST00000560320 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
CRTC3-209ENST00000560320 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
CRTC3-209ENST00000560320 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
CRTC3-209ENST00000560320 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
CRTC3-209ENST00000560320 C5P01031 1676 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 FLIIQ13045 1269 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 SLC39A6Q13433 755 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
CRTC3-209ENST00000560320 HEG1Q9ULI3 1381 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
CRTC3-209ENST00000560320 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
CRTC3-209ENST00000560320 PAPPAQ13219 1627 aa13.4□□□□□ -0.26
CRTC3-209ENST00000560320 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
CRTC3-209ENST00000560320 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
CRTC3-209ENST00000560320 EN1Q05925 392 aaPredicted RBP13.4□□□□□ -0.26
CRTC3-209ENST00000560320 DDB1Q16531 1140 aa13.4□□□□□ -0.26
CRTC3-209ENST00000560320 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
CRTC3-209ENST00000560320 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
CRTC3-209ENST00000560320 VPS72Q15906 364 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 G2E3Q7L622 706 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 HYPKQ9NX55 129 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 CHD4Q14839 1912 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
CRTC3-209ENST00000560320 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
CRTC3-209ENST00000560320 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
CRTC3-209ENST00000560320 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
CRTC3-209ENST00000560320 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
CRTC3-209ENST00000560320 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
CRTC3-209ENST00000560320 ZNF496Q96IT1 587 aaPredicted RBP13.38□□□□□ -0.27
CRTC3-209ENST00000560320 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
CRTC3-209ENST00000560320 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
CRTC3-209ENST00000560320 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
CRTC3-209ENST00000560320 A0A0G2JS52 829 aa13.36□□□□□ -0.27
CRTC3-209ENST00000560320 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
CRTC3-209ENST00000560320 MYT1Q01538 1121 aa13.36□□□□□ -0.27
CRTC3-209ENST00000560320 TEX13AQ9BXU3 409 aaPredicted RBP13.35□□□□□ -0.27
CRTC3-209ENST00000560320 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
CRTC3-209ENST00000560320 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
CRTC3-209ENST00000560320 F6X3S4 739 aa13.34□□□□□ -0.27
CRTC3-209ENST00000560320 GNAI3P08754 354 aa13.34□□□□□ -0.27
CRTC3-209ENST00000560320 HDAC1Q13547 482 aaPredicted RBP13.34□□□□□ -0.27
CRTC3-209ENST00000560320 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
CRTC3-209ENST00000560320 PHAXQ9H814 394 aaKnown RBP13.34□□□□□ -0.27
CRTC3-209ENST00000560320 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
CRTC3-209ENST00000560320 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
CRTC3-209ENST00000560320 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
CRTC3-209ENST00000560320 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
CRTC3-209ENST00000560320 SRCIN1Q9C0H9 1055 aa13.33□□□□□ -0.28
CRTC3-209ENST00000560320 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
CRTC3-209ENST00000560320 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
CRTC3-209ENST00000560320 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
CRTC3-209ENST00000560320 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
CRTC3-209ENST00000560320 IGHDP01880 384 aa13.32□□□□□ -0.28
CRTC3-209ENST00000560320 KSR2Q6VAB6 950 aa13.32□□□□□ -0.28
CRTC3-209ENST00000560320 PIGBQ92521 554 aa13.32□□□□□ -0.28
CRTC3-209ENST00000560320 BCL9O00512 1426 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 ANXA1P04083 346 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 MYL6BP14649 208 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 AIMP1Q12904 312 aaKnown RBP13.31□□□□□ -0.28
CRTC3-209ENST00000560320 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
CRTC3-209ENST00000560320 RIC3Q7Z5B4 369 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
CRTC3-209ENST00000560320 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
CRTC3-209ENST00000560320 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
CRTC3-209ENST00000560320 HMMRO75330 724 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 STARD3NLO95772 234 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 GNAI2P04899 355 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
CRTC3-209ENST00000560320 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
CRTC3-209ENST00000560320 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
CRTC3-209ENST00000560320 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
CRTC3-209ENST00000560320 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 RREB1Q92766 1687 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
CRTC3-209ENST00000560320 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 ALDH1L1O75891 902 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
CRTC3-209ENST00000560320 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 SMARCC1Q92922 1105 aaPredicted RBP13.29□□□□□ -0.28
CRTC3-209ENST00000560320 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 MEIS3Q99687 375 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 NUP188Q5SRE5 1749 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
CRTC3-209ENST00000560320 PDIA6Q15084 440 aa13.28□□□□□ -0.28
CRTC3-209ENST00000560320 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms