RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
HMBOX1-213ENST00000560269 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 STARD3NLO95772 234 aa17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 APBA3O96018 575 aa17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 CYP19A1P11511 503 aaPredicted RBP17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 ITPK1Q13572 414 aa17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 PDIA6Q15084 440 aa17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
HMBOX1-213ENST00000560269 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
HMBOX1-213ENST00000560269 CHPF2Q9P2E5 772 aa17.48■□□□□ 0.39
HMBOX1-213ENST00000560269 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
HMBOX1-213ENST00000560269 SUPT16HQ9Y5B9 1047 aaKnown RBP17.48■□□□□ 0.39
HMBOX1-213ENST00000560269 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
HMBOX1-213ENST00000560269 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
HMBOX1-213ENST00000560269 A1BGP04217 495 aa17.46■□□□□ 0.39
HMBOX1-213ENST00000560269 LRP10Q7Z4F1 713 aa17.46■□□□□ 0.39
HMBOX1-213ENST00000560269 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
HMBOX1-213ENST00000560269 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 PROM2Q8N271 834 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
HMBOX1-213ENST00000560269 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 G2E3Q7L622 706 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 PTPRCP08575 1304 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
HMBOX1-213ENST00000560269 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
HMBOX1-213ENST00000560269 ANXA1P04083 346 aa17.43■□□□□ 0.38
HMBOX1-213ENST00000560269 KCNQ4P56696 695 aa17.43■□□□□ 0.38
HMBOX1-213ENST00000560269 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
HMBOX1-213ENST00000560269 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
HMBOX1-213ENST00000560269 MYL6BP14649 208 aa17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 FLIIQ13045 1269 aa17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 ZBTB1Q9Y2K1 713 aa17.42■□□□□ 0.38
HMBOX1-213ENST00000560269 PLIN1O60240 522 aa17.41■□□□□ 0.38
HMBOX1-213ENST00000560269 IL6STP40189 918 aaPredicted RBP17.41■□□□□ 0.38
HMBOX1-213ENST00000560269 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
HMBOX1-213ENST00000560269 CAMKK2Q96RR4 588 aa17.41■□□□□ 0.38
HMBOX1-213ENST00000560269 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
HMBOX1-213ENST00000560269 BAG6P46379 1132 aa17.4■□□□□ 0.38
HMBOX1-213ENST00000560269 API5Q9BZZ5 524 aaKnown RBP17.4■□□□□ 0.38
HMBOX1-213ENST00000560269 TRIM27P14373 513 aa17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
HMBOX1-213ENST00000560269 MS4A1P11836 297 aa17.38■□□□□ 0.37
HMBOX1-213ENST00000560269 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
HMBOX1-213ENST00000560269 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
HMBOX1-213ENST00000560269 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 RPS6KA4O75676 772 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 TNNQ9UQP3 1299 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 ABCC4O15439 1325 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 ADCY9O60503 1353 aa17.37■□□□□ 0.37
HMBOX1-213ENST00000560269 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 KSR2Q6VAB6 950 aa17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 UPF1Q92900 1129 aaKnown RBP eCLIP17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
HMBOX1-213ENST00000560269 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 DEFB132Q7Z7B7 95 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 AK7Q96M32 723 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 COL15A1P39059 1388 aa17.35■□□□□ 0.37
HMBOX1-213ENST00000560269 A0A087WZG4 1122 aa17.34■□□□□ 0.37
HMBOX1-213ENST00000560269 GNPATO15228 680 aa17.34■□□□□ 0.37
HMBOX1-213ENST00000560269 RLBP1P12271 317 aa17.34■□□□□ 0.37
HMBOX1-213ENST00000560269 CLUAP1Q96AJ1 413 aa17.34■□□□□ 0.37
HMBOX1-213ENST00000560269 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
HMBOX1-213ENST00000560269 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms