RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 USP42Q9H9J4 1324 aaKnown RBP22.85■■□□□ 1.25
AC105339.3-201ENST00000560043 ZPR1O75312 459 aa22.84■■□□□ 1.25
AC105339.3-201ENST00000560043 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
AC105339.3-201ENST00000560043 GPR162Q16538 588 aa22.84■■□□□ 1.25
AC105339.3-201ENST00000560043 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
AC105339.3-201ENST00000560043 PARP3Q9Y6F1 533 aa22.83■■□□□ 1.25
AC105339.3-201ENST00000560043 COL15A1P39059 1388 aa22.82■■□□□ 1.24
AC105339.3-201ENST00000560043 RIPK4P57078 832 aa22.82■■□□□ 1.24
AC105339.3-201ENST00000560043 C4AP0C0L4 1744 aa22.82■■□□□ 1.24
AC105339.3-201ENST00000560043 SNRPA1P09661 255 aaKnown RBP22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 TMPOP42166 694 aaKnown RBP22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 FKBP8Q14318 412 aa22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 MIS18AQ9NYP9 233 aa22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 NARFQ9UHQ1 456 aa22.81■■□□□ 1.24
AC105339.3-201ENST00000560043 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 A0A087WZG4 1122 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 LMOD3Q0VAK6 560 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 USPL1Q5W0Q7 1092 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 RUNDC1Q96C34 613 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 THUMPD2Q9BTF0 503 aaKnown RBP22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 ADAMTS8Q9UP79 889 aa22.8■■□□□ 1.24
AC105339.3-201ENST00000560043 A1BGP04217 495 aa22.79■■□□□ 1.24
AC105339.3-201ENST00000560043 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
AC105339.3-201ENST00000560043 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
AC105339.3-201ENST00000560043 YY1P25490 414 aa22.77■■□□□ 1.24
AC105339.3-201ENST00000560043 IL6STP40189 918 aaPredicted RBP22.77■■□□□ 1.24
AC105339.3-201ENST00000560043 PRAMEF22A3QJZ6 481 aa22.76■■□□□ 1.23
AC105339.3-201ENST00000560043 TM4SF1P30408 202 aa22.76■■□□□ 1.23
AC105339.3-201ENST00000560043 ZNF330Q9Y3S2 320 aaPredicted RBP22.76■■□□□ 1.23
AC105339.3-201ENST00000560043 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
AC105339.3-201ENST00000560043 GRIN3BO60391 1043 aa22.74■■□□□ 1.23
AC105339.3-201ENST00000560043 DDR1Q08345 913 aa22.74■■□□□ 1.23
AC105339.3-201ENST00000560043 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
AC105339.3-201ENST00000560043 TGFB2P61812 414 aa22.73■■□□□ 1.23
AC105339.3-201ENST00000560043 BCL2L12Q9HB09 334 aa22.73■■□□□ 1.23
AC105339.3-201ENST00000560043 POLRMTO00411 1230 aaKnown RBP22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 ANP32CO43423 234 aa22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 YBX3P16989 372 aaKnown RBP eCLIP22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 EIF4A1P60842 406 aaKnown RBP22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 TSPYL4Q9UJ04 414 aa22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 TBC1D2BQ9UPU7 963 aa22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 C10orf71Q711Q0 1435 aa22.72■■□□□ 1.23
AC105339.3-201ENST00000560043 NFIXQ14938 502 aa22.71■■□□□ 1.23
AC105339.3-201ENST00000560043 BABAM1Q9NWV8 329 aa22.71■■□□□ 1.23
AC105339.3-201ENST00000560043 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
AC105339.3-201ENST00000560043 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
AC105339.3-201ENST00000560043 KDM3BQ7LBC6 1761 aa22.69■■□□□ 1.22
AC105339.3-201ENST00000560043 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
AC105339.3-201ENST00000560043 TRIM35Q9UPQ4 493 aa22.68■■□□□ 1.22
AC105339.3-201ENST00000560043 PXDNLA1KZ92 1463 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 KIF13BQ9NQT8 1826 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 A0A0G2JLW4 131 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 NBPF26B4DH59 902 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 NBPF10Q6P3W6 841 aaKnown RBP22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 BICDL1Q6ZP65 573 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 NBPF15Q8N660 670 aa22.67■■□□□ 1.22
AC105339.3-201ENST00000560043 CAMTA2O94983 1202 aa22.66■■□□□ 1.22
AC105339.3-201ENST00000560043 SERPINB2P05120 415 aa22.66■■□□□ 1.22
AC105339.3-201ENST00000560043 DPEP1P16444 411 aa22.66■■□□□ 1.22
AC105339.3-201ENST00000560043 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
AC105339.3-201ENST00000560043 WWC3Q9ULE0 1092 aa22.66■■□□□ 1.22
AC105339.3-201ENST00000560043 TBC1D9BQ66K14 1250 aa22.65■■□□□ 1.22
AC105339.3-201ENST00000560043 APAF1O14727 1248 aa22.64■■□□□ 1.21
AC105339.3-201ENST00000560043 CHL1O00533 1208 aa22.63■■□□□ 1.21
AC105339.3-201ENST00000560043 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
AC105339.3-201ENST00000560043 CHD4Q14839 1912 aa22.63■■□□□ 1.21
AC105339.3-201ENST00000560043 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
AC105339.3-201ENST00000560043 SETDB2Q96T68 719 aa22.62■■□□□ 1.21
AC105339.3-201ENST00000560043 MRS2Q9HD23 443 aa22.62■■□□□ 1.21
AC105339.3-201ENST00000560043 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
AC105339.3-201ENST00000560043 SCN7AQ01118 1682 aa22.62■■□□□ 1.21
AC105339.3-201ENST00000560043 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
AC105339.3-201ENST00000560043 BCS1LQ9Y276 419 aa22.61■■□□□ 1.21
AC105339.3-201ENST00000560043 KIAA1551Q9HCM1 1747 aa22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 RGL2O15211 777 aa22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 KCNA3P22001 575 aa22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 PIM2Q9P1W9 311 aa22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 N4BP2Q86UW6 1770 aaPredicted RBP22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 CARMIL3Q8ND23 1372 aa22.6■■□□□ 1.21
AC105339.3-201ENST00000560043 ERBB4Q15303 1308 aa22.59■■□□□ 1.21
AC105339.3-201ENST00000560043 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
AC105339.3-201ENST00000560043 NRXN2Q9P2S2 1712 aa22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 MYL6BP14649 208 aa22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 EIF2S2P20042 333 aaKnown RBP22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 CHRNA5P30532 468 aa22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 CFAP44Q96MT7 982 aa22.58■■□□□ 1.21
AC105339.3-201ENST00000560043 AFDNP55196 1824 aaKnown RBP22.57■■□□□ 1.2
AC105339.3-201ENST00000560043 NPHP1O15259 732 aa22.56■■□□□ 1.2
AC105339.3-201ENST00000560043 DALRD3Q5D0E6 543 aaKnown RBP22.56■■□□□ 1.2
AC105339.3-201ENST00000560043 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
AC105339.3-201ENST00000560043 ERVV-1B6SEH8 477 aa22.55■■□□□ 1.2
AC105339.3-201ENST00000560043 PRR5LQ6MZQ0 368 aa22.55■■□□□ 1.2
AC105339.3-201ENST00000560043 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
AC105339.3-201ENST00000560043 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
AC105339.3-201ENST00000560043 HLFQ16534 295 aa22.54■■□□□ 1.2
AC105339.3-201ENST00000560043 C2CD5Q86YS7 1000 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms