RNA–Protein interactions for RNA: ENST00000559842.1

PRTG-203, Transcript of protogenin, humanhuman

TSL 4

Gene PRTG, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTG-203ENST00000559842 DCTN1Q14203 1278 aa8.32□□□□□ -1.08
PRTG-203ENST00000559842 TAF7Q15545 349 aaPredicted RBP8.32□□□□□ -1.08
PRTG-203ENST00000559842 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
PRTG-203ENST00000559842 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
PRTG-203ENST00000559842 MCM10Q7L590 875 aa8.32□□□□□ -1.08
PRTG-203ENST00000559842 IL17REQ8NFR9 667 aa8.32□□□□□ -1.08
PRTG-203ENST00000559842 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
PRTG-203ENST00000559842 LARP6Q9BRS8 491 aaKnown RBP8.32□□□□□ -1.08
PRTG-203ENST00000559842 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
PRTG-203ENST00000559842 MEGF6O75095 1541 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
PRTG-203ENST00000559842 VAMP4O75379 141 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 HSP90AB1P08238 724 aaKnown RBP8.31□□□□□ -1.08
PRTG-203ENST00000559842 FOXK1P85037 733 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 E2F4Q16254 413 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 TWISTNBQ3B726 338 aaPredicted RBP8.31□□□□□ -1.08
PRTG-203ENST00000559842 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 SSH1Q8WYL5 1049 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 ARHGAP45Q92619 1136 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 SMC4Q9NTJ3 1288 aa8.31□□□□□ -1.08
PRTG-203ENST00000559842 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
PRTG-203ENST00000559842 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 SIPA1L3O60292 1781 aaPredicted RBP8.3□□□□□ -1.08
PRTG-203ENST00000559842 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 SCN11AQ9UI33 1791 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 CACNA1FO60840 1977 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 NWD2Q9ULI1 1742 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 PLIN1O60240 522 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 HOXB7P09629 217 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 IFNL2Q8IZJ0 200 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
PRTG-203ENST00000559842 TSPYL4Q9UJ04 414 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 LAS1LQ9Y4W2 734 aaKnown RBP8.3□□□□□ -1.08
PRTG-203ENST00000559842 MRC1P22897 1456 aa8.3□□□□□ -1.08
PRTG-203ENST00000559842 RNMTO43148 476 aaKnown RBP8.29□□□□□ -1.08
PRTG-203ENST00000559842 PHKG2P15735 406 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 CANXP27824 592 aaKnown RBP8.29□□□□□ -1.08
PRTG-203ENST00000559842 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 TOM1L2Q6ZVM7 507 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 C8orf58Q8NAV2 365 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 EXOC6Q8TAG9 804 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 JCADQ9P266 1359 aa8.29□□□□□ -1.08
PRTG-203ENST00000559842 IL2RBP14784 551 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 TEFQ10587 303 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 C20orf194Q5TEA3 1177 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
PRTG-203ENST00000559842 TSPYL6Q8N831 410 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 CCDC136Q96JN2 1154 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 CRBNQ96SW2 442 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 DISP2A7MBM2 1401 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 PCDH11XQ9BZA7 1347 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 PCDH11YQ9BZA8 1340 aa8.28□□□□□ -1.08
PRTG-203ENST00000559842 HEG1Q9ULI3 1381 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 TRIM27P14373 513 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 EVA1CP58658 441 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 PPP1R15BQ5SWA1 713 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 DZIP1LQ8IYY4 767 aaKnown RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 ZCRB1Q8TBF4 217 aaKnown RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 FRAT1Q92837 279 aaPredicted RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 CHMP4BQ9H444 224 aaKnown RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 BTG4Q9NY30 223 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 SLIT2O94813 1529 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
PRTG-203ENST00000559842 PTPRCP08575 1304 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 SPATA31A6Q5VVP1 1343 aa8.27□□□□□ -1.09
PRTG-203ENST00000559842 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 CYP27B1O15528 508 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
PRTG-203ENST00000559842 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
PRTG-203ENST00000559842 MPRIPQ6WCQ1 1025 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 FTSJ3Q8IY81 847 aaKnown RBP8.26□□□□□ -1.09
PRTG-203ENST00000559842 KCNV2Q8TDN2 545 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
PRTG-203ENST00000559842 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 LGR6Q9HBX8 967 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 DDX19BQ9UMR2 479 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 WNK3Q9BYP7 1800 aa8.26□□□□□ -1.09
PRTG-203ENST00000559842 LRP6O75581 1613 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 BTBD11A6QL63 1104 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 MVPQ14764 893 aaKnown RBP8.25□□□□□ -1.09
PRTG-203ENST00000559842 CCDC30Q5VVM6 783 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 B4GALNT3Q6L9W6 998 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 CLUAP1Q96AJ1 413 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.25□□□□□ -1.09
PRTG-203ENST00000559842 NOB1Q9ULX3 412 aaKnown RBP8.25□□□□□ -1.09
PRTG-203ENST00000559842 ABCC4O15439 1325 aa8.25□□□□□ -1.09
PRTG-203ENST00000559842 C2orf72A6NCS6 295 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms