RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-208ENST00000559757 KDM3BQ7LBC6 1761 aa22.35■■□□□ 1.17
RNF111-208ENST00000559757 TMPOP42166 694 aaKnown RBP22.35■■□□□ 1.17
RNF111-208ENST00000559757 ADAMTS8Q9UP79 889 aa22.35■■□□□ 1.17
RNF111-208ENST00000559757 ZBTB1Q9Y2K1 713 aa22.35■■□□□ 1.17
RNF111-208ENST00000559757 USP42Q9H9J4 1324 aaKnown RBP22.34■■□□□ 1.17
RNF111-208ENST00000559757 KCNQ3O43525 872 aa22.34■■□□□ 1.17
RNF111-208ENST00000559757 GYS1P13807 737 aa22.34■■□□□ 1.17
RNF111-208ENST00000559757 CCDC146Q8IYE0 955 aa22.34■■□□□ 1.17
RNF111-208ENST00000559757 COL15A1P39059 1388 aa22.34■■□□□ 1.17
RNF111-208ENST00000559757 ZPR1O75312 459 aa22.33■■□□□ 1.17
RNF111-208ENST00000559757 SNRPA1P09661 255 aaKnown RBP22.33■■□□□ 1.17
RNF111-208ENST00000559757 CD2APQ9Y5K6 639 aa22.33■■□□□ 1.17
RNF111-208ENST00000559757 MMP10P09238 476 aa22.32■■□□□ 1.16
RNF111-208ENST00000559757 CANXP27824 592 aaKnown RBP22.32■■□□□ 1.16
RNF111-208ENST00000559757 A0A087WZG4 1122 aa22.31■■□□□ 1.16
RNF111-208ENST00000559757 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
RNF111-208ENST00000559757 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
RNF111-208ENST00000559757 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
RNF111-208ENST00000559757 NARFQ9UHQ1 456 aa22.3■■□□□ 1.16
RNF111-208ENST00000559757 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
RNF111-208ENST00000559757 EIF5P55010 431 aaKnown RBP22.29■■□□□ 1.16
RNF111-208ENST00000559757 BABAM1Q9NWV8 329 aa22.29■■□□□ 1.16
RNF111-208ENST00000559757 SRP68Q9UHB9 627 aaKnown RBP22.29■■□□□ 1.16
RNF111-208ENST00000559757 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
RNF111-208ENST00000559757 PARP3Q9Y6F1 533 aa22.28■■□□□ 1.16
RNF111-208ENST00000559757 NEUROD2Q15784 382 aa22.27■■□□□ 1.16
RNF111-208ENST00000559757 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
RNF111-208ENST00000559757 NLGN2Q8NFZ4 835 aa22.27■■□□□ 1.16
RNF111-208ENST00000559757 RRP7AQ9Y3A4 280 aaKnown RBP22.27■■□□□ 1.16
RNF111-208ENST00000559757 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
RNF111-208ENST00000559757 KIF13BQ9NQT8 1826 aa22.27■■□□□ 1.15
RNF111-208ENST00000559757 FKBP8Q14318 412 aa22.26■■□□□ 1.15
RNF111-208ENST00000559757 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
RNF111-208ENST00000559757 A1BGP04217 495 aa22.25■■□□□ 1.15
RNF111-208ENST00000559757 SCN7AQ01118 1682 aa22.25■■□□□ 1.15
RNF111-208ENST00000559757 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
RNF111-208ENST00000559757 GPR162Q16538 588 aa22.24■■□□□ 1.15
RNF111-208ENST00000559757 ZNF330Q9Y3S2 320 aaPredicted RBP22.24■■□□□ 1.15
RNF111-208ENST00000559757 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
RNF111-208ENST00000559757 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
RNF111-208ENST00000559757 C10orf71Q711Q0 1435 aa22.23■■□□□ 1.15
RNF111-208ENST00000559757 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
RNF111-208ENST00000559757 TRIM35Q9UPQ4 493 aa22.22■■□□□ 1.15
RNF111-208ENST00000559757 BCORQ6W2J9 1755 aa22.21■■□□□ 1.15
RNF111-208ENST00000559757 TM4SF1P30408 202 aa22.21■■□□□ 1.15
RNF111-208ENST00000559757 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
RNF111-208ENST00000559757 APAF1O14727 1248 aa22.2■■□□□ 1.14
RNF111-208ENST00000559757 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
RNF111-208ENST00000559757 CHD4Q14839 1912 aa22.19■■□□□ 1.14
RNF111-208ENST00000559757 TGFB2P61812 414 aa22.19■■□□□ 1.14
RNF111-208ENST00000559757 DDR1Q08345 913 aa22.19■■□□□ 1.14
RNF111-208ENST00000559757 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
RNF111-208ENST00000559757 POLRMTO00411 1230 aaKnown RBP22.18■■□□□ 1.14
RNF111-208ENST00000559757 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
RNF111-208ENST00000559757 NFIXQ14938 502 aa22.18■■□□□ 1.14
RNF111-208ENST00000559757 DZIP3Q86Y13 1208 aaKnown RBP22.18■■□□□ 1.14
RNF111-208ENST00000559757 TBC1D2BQ9UPU7 963 aa22.18■■□□□ 1.14
RNF111-208ENST00000559757 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
RNF111-208ENST00000559757 ERBB4Q15303 1308 aa22.17■■□□□ 1.14
RNF111-208ENST00000559757 GRIN3BO60391 1043 aa22.17■■□□□ 1.14
RNF111-208ENST00000559757 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
RNF111-208ENST00000559757 CHL1O00533 1208 aa22.16■■□□□ 1.14
RNF111-208ENST00000559757 PIP4K2AP48426 406 aaPredicted RBP22.16■■□□□ 1.14
RNF111-208ENST00000559757 ZNF652Q9Y2D9 606 aa22.16■■□□□ 1.14
RNF111-208ENST00000559757 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
RNF111-208ENST00000559757 KIAA1551Q9HCM1 1747 aa22.16■■□□□ 1.14
RNF111-208ENST00000559757 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
RNF111-208ENST00000559757 NBPF26B4DH59 902 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 RGL2O15211 777 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 CAMTA2O94983 1202 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 NBPF10Q6P3W6 841 aaKnown RBP22.15■■□□□ 1.14
RNF111-208ENST00000559757 NBPF15Q8N660 670 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
RNF111-208ENST00000559757 CLEC4GQ6UXB4 293 aa22.14■■□□□ 1.13
RNF111-208ENST00000559757 UTRNP46939 3433 aa22.14■■□□□ 1.13
RNF111-208ENST00000559757 CARMIL3Q8ND23 1372 aa22.13■■□□□ 1.13
RNF111-208ENST00000559757 SERPINB2P05120 415 aa22.13■■□□□ 1.13
RNF111-208ENST00000559757 YY1P25490 414 aa22.13■■□□□ 1.13
RNF111-208ENST00000559757 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
RNF111-208ENST00000559757 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
RNF111-208ENST00000559757 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
RNF111-208ENST00000559757 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
RNF111-208ENST00000559757 GNAI1P63096 354 aa22.11■■□□□ 1.13
RNF111-208ENST00000559757 SETDB2Q96T68 719 aa22.11■■□□□ 1.13
RNF111-208ENST00000559757 IFT57Q9NWB7 429 aa22.11■■□□□ 1.13
RNF111-208ENST00000559757 BRCA1P38398 1863 aaKnown RBP22.11■■□□□ 1.13
RNF111-208ENST00000559757 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
RNF111-208ENST00000559757 A0A0G2JLW4 131 aa22.09■■□□□ 1.13
RNF111-208ENST00000559757 HOXB7P09629 217 aa22.09■■□□□ 1.13
RNF111-208ENST00000559757 EIF2S2P20042 333 aaKnown RBP22.09■■□□□ 1.13
RNF111-208ENST00000559757 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
RNF111-208ENST00000559757 KIF6Q6ZMV9 814 aa22.09■■□□□ 1.13
RNF111-208ENST00000559757 MYL6BP14649 208 aa22.08■■□□□ 1.13
RNF111-208ENST00000559757 DPEP1P16444 411 aa22.08■■□□□ 1.13
RNF111-208ENST00000559757 ERVV-1B6SEH8 477 aa22.07■■□□□ 1.12
RNF111-208ENST00000559757 ZNF853P0CG23 659 aa22.07■■□□□ 1.12
RNF111-208ENST00000559757 MBIPQ9NS73 344 aa22.07■■□□□ 1.12
RNF111-208ENST00000559757 NUP98P52948 1817 aa22.06■■□□□ 1.12
RNF111-208ENST00000559757 NPHP1O15259 732 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms