RNA–Protein interactions for RNA: ENST00000558977.1

RNF111-203, Transcript of ring finger protein 111, humanhuman

TSL 2

Gene RNF111, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-203ENST00000558977 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
RNF111-203ENST00000558977 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
RNF111-203ENST00000558977 RPS6KA4O75676 772 aa9.48□□□□□ -0.89
RNF111-203ENST00000558977 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
RNF111-203ENST00000558977 NLGN2Q8NFZ4 835 aa9.48□□□□□ -0.89
RNF111-203ENST00000558977 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
RNF111-203ENST00000558977 C10orf71Q711Q0 1435 aa9.48□□□□□ -0.89
RNF111-203ENST00000558977 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
RNF111-203ENST00000558977 U2AF1L5P0DN76 240 aaPredicted RBP9.47□□□□□ -0.89
RNF111-203ENST00000558977 U2AF1Q01081 240 aaKnown RBP eCLIP9.47□□□□□ -0.89
RNF111-203ENST00000558977 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
RNF111-203ENST00000558977 RALBP1Q15311 655 aa9.47□□□□□ -0.89
RNF111-203ENST00000558977 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
RNF111-203ENST00000558977 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
RNF111-203ENST00000558977 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
RNF111-203ENST00000558977 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
RNF111-203ENST00000558977 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
RNF111-203ENST00000558977 CYP19A1P11511 503 aaPredicted RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 GYS1P13807 737 aa9.46□□□□□ -0.9
RNF111-203ENST00000558977 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 MYBBP1AQ9BQG0 1328 aaKnown RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
RNF111-203ENST00000558977 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
RNF111-203ENST00000558977 PXDNLA1KZ92 1463 aa9.46□□□□□ -0.9
RNF111-203ENST00000558977 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
RNF111-203ENST00000558977 ZNF790Q6PG37 636 aa9.45□□□□□ -0.9
RNF111-203ENST00000558977 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
RNF111-203ENST00000558977 ZBTB1Q9Y2K1 713 aa9.45□□□□□ -0.9
RNF111-203ENST00000558977 COL15A1P39059 1388 aa9.45□□□□□ -0.9
RNF111-203ENST00000558977 COL11A2P13942 1736 aaPredicted RBP9.45□□□□□ -0.9
RNF111-203ENST00000558977 HTATSF1O43719 755 aaKnown RBP9.44□□□□□ -0.9
RNF111-203ENST00000558977 TEFQ10587 303 aa9.44□□□□□ -0.9
RNF111-203ENST00000558977 MCM10Q7L590 875 aa9.44□□□□□ -0.9
RNF111-203ENST00000558977 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
RNF111-203ENST00000558977 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
RNF111-203ENST00000558977 ARFGEF2Q9Y6D5 1785 aa9.44□□□□□ -0.9
RNF111-203ENST00000558977 NUP98P52948 1817 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 KCNQ3O43525 872 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 MMP10P09238 476 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 POTEHQ6S545 545 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 TTC5Q8N0Z6 440 aa9.43□□□□□ -0.9
RNF111-203ENST00000558977 CACNA1SQ13698 1873 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 BTBD11A6QL63 1104 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
RNF111-203ENST00000558977 ZEB1P37275 1124 aaPredicted RBP9.42□□□□□ -0.9
RNF111-203ENST00000558977 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
RNF111-203ENST00000558977 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 SRP68Q9UHB9 627 aaKnown RBP9.42□□□□□ -0.9
RNF111-203ENST00000558977 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
RNF111-203ENST00000558977 RFC4P35249 363 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
RNF111-203ENST00000558977 DDR1Q08345 913 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 FKBP8Q14318 412 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 FMNL2Q96PY5 1086 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 ANKRD36CQ5JPF3 1778 aa9.41□□□□□ -0.9
RNF111-203ENST00000558977 SBF1O95248 1867 aa9.4□□□□□ -0.9
RNF111-203ENST00000558977 PRAMEF22A3QJZ6 481 aa9.4□□□□□ -0.9
RNF111-203ENST00000558977 POLRMTO00411 1230 aaKnown RBP9.4□□□□□ -0.9
RNF111-203ENST00000558977 TM4SF1P30408 202 aa9.4□□□□□ -0.9
RNF111-203ENST00000558977 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
RNF111-203ENST00000558977 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
RNF111-203ENST00000558977 NARFQ9UHQ1 456 aa9.4□□□□□ -0.9
RNF111-203ENST00000558977 YY1P25490 414 aa9.39□□□□□ -0.91
RNF111-203ENST00000558977 TEX13AQ9BXU3 409 aaPredicted RBP9.39□□□□□ -0.91
RNF111-203ENST00000558977 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
RNF111-203ENST00000558977 ADCY9O60503 1353 aa9.38□□□□□ -0.91
RNF111-203ENST00000558977 STARD3NLO95772 234 aa9.38□□□□□ -0.91
RNF111-203ENST00000558977 IL6STP40189 918 aaPredicted RBP9.38□□□□□ -0.91
RNF111-203ENST00000558977 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
RNF111-203ENST00000558977 GPR162Q16538 588 aa9.38□□□□□ -0.91
RNF111-203ENST00000558977 THUMPD2Q9BTF0 503 aaKnown RBP9.38□□□□□ -0.91
RNF111-203ENST00000558977 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
RNF111-203ENST00000558977 PARP3Q9Y6F1 533 aa9.38□□□□□ -0.91
RNF111-203ENST00000558977 TNRC6CQ9HCJ0 1690 aaKnown RBP9.38□□□□□ -0.91
RNF111-203ENST00000558977 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
RNF111-203ENST00000558977 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 A1BGP04217 495 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 KCNA3P22001 575 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 CANXP27824 592 aaKnown RBP9.37□□□□□ -0.91
RNF111-203ENST00000558977 TMPOP42166 694 aaKnown RBP9.37□□□□□ -0.91
RNF111-203ENST00000558977 TGFB2P61812 414 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 NFIXQ14938 502 aa9.37□□□□□ -0.91
RNF111-203ENST00000558977 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 NBPF26B4DH59 902 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 ZPR1O75312 459 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 NEFMP07197 916 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 EIF4A1P60842 406 aaKnown RBP9.36□□□□□ -0.91
RNF111-203ENST00000558977 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
RNF111-203ENST00000558977 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 MIS18AQ9NYP9 233 aa9.36□□□□□ -0.91
RNF111-203ENST00000558977 ADAMTS8Q9UP79 889 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms