RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
GABPB1-208ENST00000558970 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
GABPB1-208ENST00000558970 ZNF827Q17R98 1081 aa16.1■□□□□ 0.17
GABPB1-208ENST00000558970 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
GABPB1-208ENST00000558970 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
GABPB1-208ENST00000558970 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-208ENST00000558970 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
GABPB1-208ENST00000558970 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
GABPB1-208ENST00000558970 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
GABPB1-208ENST00000558970 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
GABPB1-208ENST00000558970 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
GABPB1-208ENST00000558970 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
GABPB1-208ENST00000558970 AK7Q96M32 723 aa16.09■□□□□ 0.17
GABPB1-208ENST00000558970 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
GABPB1-208ENST00000558970 PHF14O94880 888 aa16.08■□□□□ 0.16
GABPB1-208ENST00000558970 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
GABPB1-208ENST00000558970 CRKLP46109 303 aaKnown RBP16.08■□□□□ 0.16
GABPB1-208ENST00000558970 GNPATO15228 680 aa16.07■□□□□ 0.16
GABPB1-208ENST00000558970 A1BGP04217 495 aa16.07■□□□□ 0.16
GABPB1-208ENST00000558970 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
GABPB1-208ENST00000558970 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
GABPB1-208ENST00000558970 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
GABPB1-208ENST00000558970 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
GABPB1-208ENST00000558970 QSER1Q2KHR3 1735 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 STARD3NLO95772 234 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 ANXA1P04083 346 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 TFCP2L1Q9NZI6 479 aa16.06■□□□□ 0.16
GABPB1-208ENST00000558970 MYL6BP14649 208 aa16.05■□□□□ 0.16
GABPB1-208ENST00000558970 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
GABPB1-208ENST00000558970 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
GABPB1-208ENST00000558970 ARXQ96QS3 562 aa16.05■□□□□ 0.16
GABPB1-208ENST00000558970 TEX13AQ9BXU3 409 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-208ENST00000558970 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
GABPB1-208ENST00000558970 MSH5O43196 834 aa16.04■□□□□ 0.16
GABPB1-208ENST00000558970 SLC15A2Q16348 729 aa16.04■□□□□ 0.16
GABPB1-208ENST00000558970 INTS5Q6P9B9 1019 aaKnown RBP16.04■□□□□ 0.16
GABPB1-208ENST00000558970 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
GABPB1-208ENST00000558970 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
GABPB1-208ENST00000558970 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.16
GABPB1-208ENST00000558970 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
GABPB1-208ENST00000558970 RTCBQ9Y3I0 505 aaKnown RBP16.02■□□□□ 0.16
GABPB1-208ENST00000558970 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
GABPB1-208ENST00000558970 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
GABPB1-208ENST00000558970 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
GABPB1-208ENST00000558970 NBPF15Q8N660 670 aa16.01■□□□□ 0.15
GABPB1-208ENST00000558970 COL15A1P39059 1388 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 CASZ1Q86V15 1759 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 SCN7AQ01118 1682 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
GABPB1-208ENST00000558970 VAMP4O75379 141 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 HOXB7P09629 217 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 RC3H1Q5TC82 1133 aaKnown RBP16■□□□□ 0.15
GABPB1-208ENST00000558970 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
GABPB1-208ENST00000558970 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 PDGFDQ9GZP0 370 aaPredicted RBP16■□□□□ 0.15
GABPB1-208ENST00000558970 SPON1Q9HCB6 807 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 CACNA1FO60840 1977 aa16■□□□□ 0.15
GABPB1-208ENST00000558970 SOS1Q07889 1333 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-208ENST00000558970 PNPLA7Q6ZV29 1317 aa15.99■□□□□ 0.15
GABPB1-208ENST00000558970 RPS6KA4O75676 772 aa15.99■□□□□ 0.15
GABPB1-208ENST00000558970 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
GABPB1-208ENST00000558970 ARFGEF2Q9Y6D5 1785 aa15.99■□□□□ 0.15
GABPB1-208ENST00000558970 NUP98P52948 1817 aa15.98■□□□□ 0.15
GABPB1-208ENST00000558970 CCDC30Q5VVM6 783 aa15.98■□□□□ 0.15
GABPB1-208ENST00000558970 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
GABPB1-208ENST00000558970 YY1P25490 414 aa15.97■□□□□ 0.15
GABPB1-208ENST00000558970 PDIA6Q15084 440 aa15.97■□□□□ 0.15
GABPB1-208ENST00000558970 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
GABPB1-208ENST00000558970 COL23A1Q86Y22 540 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-208ENST00000558970 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
GABPB1-208ENST00000558970 PHAXQ9H814 394 aaKnown RBP15.97■□□□□ 0.15
GABPB1-208ENST00000558970 DBF4Q9UBU7 674 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-208ENST00000558970 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
GABPB1-208ENST00000558970 TBC1D2BQ9UPU7 963 aa15.97■□□□□ 0.15
GABPB1-208ENST00000558970 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
GABPB1-208ENST00000558970 SSFA2P28290 1259 aa15.96■□□□□ 0.15
GABPB1-208ENST00000558970 RFC4P35249 363 aa15.96■□□□□ 0.15
GABPB1-208ENST00000558970 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
GABPB1-208ENST00000558970 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
GABPB1-208ENST00000558970 DDX21Q9NR30 783 aaKnown RBP eCLIP15.96■□□□□ 0.15
GABPB1-208ENST00000558970 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
GABPB1-208ENST00000558970 ANKRD36CQ5JPF3 1778 aa15.95■□□□□ 0.14
GABPB1-208ENST00000558970 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
GABPB1-208ENST00000558970 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
GABPB1-208ENST00000558970 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
GABPB1-208ENST00000558970 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
GABPB1-208ENST00000558970 XAGE3Q8WTP9 111 aa15.95■□□□□ 0.14
GABPB1-208ENST00000558970 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 COPS6Q7L5N1 327 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 G2E3Q7L622 706 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 ZBTB3Q9H5J0 574 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 SMC4Q9NTJ3 1288 aa15.94■□□□□ 0.14
GABPB1-208ENST00000558970 ZPR1O75312 459 aa15.93■□□□□ 0.14
GABPB1-208ENST00000558970 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
GABPB1-208ENST00000558970 USPL1Q5W0Q7 1092 aa15.93■□□□□ 0.14
GABPB1-208ENST00000558970 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
GABPB1-208ENST00000558970 SSH1Q8WYL5 1049 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms