RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 XBP1P17861 261 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
TMC3-202ENST00000558726 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
TMC3-202ENST00000558726 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
TMC3-202ENST00000558726 PTPN14Q15678 1187 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
TMC3-202ENST00000558726 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 NOLC1Q14978 699 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMC3-202ENST00000558726 HSP90B2PQ58FF3 399 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 SART3Q15020 963 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 TRHP20396 242 aaPredicted RBP12.79□□□□□ -0.36
TMC3-202ENST00000558726 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
TMC3-202ENST00000558726 CDKL5O76039 1030 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 SERPINC1P01008 464 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 CAMK4Q16566 473 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 ERCC4Q92889 916 aaPredicted RBP12.78□□□□□ -0.36
TMC3-202ENST00000558726 SLC26A8Q96RN1 970 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 ABCC4O15439 1325 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
TMC3-202ENST00000558726 PDILTQ8N807 584 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 KIF18AQ8NI77 898 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 PPP1R9BQ96SB3 815 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 F13A1P00488 732 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMC3-202ENST00000558726 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 ACEP12821 1306 aa12.78□□□□□ -0.36
TMC3-202ENST00000558726 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 HYPKQ9NX55 129 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 SPG7Q9UQ90 795 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 CHMLP26374 656 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.36
TMC3-202ENST00000558726 GSDMDP57764 484 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.36
TMC3-202ENST00000558726 AOX1Q06278 1338 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 FBLN1P23142 703 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 EDC4Q6P2E9 1401 aaKnown RBP12.77□□□□□ -0.37
TMC3-202ENST00000558726 TNNT1P13805 278 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
TMC3-202ENST00000558726 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 RBSNQ9H1K0 784 aa12.77□□□□□ -0.37
TMC3-202ENST00000558726 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 LAMC1P11047 1609 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 IL13P35225 146 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 ZSCAN16Q9H4T2 348 aaPredicted RBP12.76□□□□□ -0.37
TMC3-202ENST00000558726 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 ZNF165P49910 485 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
TMC3-202ENST00000558726 UNC13BO14795 1591 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
TMC3-202ENST00000558726 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
TMC3-202ENST00000558726 STX1AQ16623 288 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 MSH6P52701 1360 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
TMC3-202ENST00000558726 USP19O94966 1318 aa12.75□□□□□ -0.37
TMC3-202ENST00000558726 CHL1O00533 1208 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 GIMAP6Q6P9H5 292 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 CKAP2LQ8IYA6 745 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 KIAA0232Q92628 1395 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 UBXN4Q92575 508 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 CEP126Q9P2H0 1117 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
TMC3-202ENST00000558726 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 CBX1P83916 185 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 AK7Q96M32 723 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 FLT4P35916 1363 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
TMC3-202ENST00000558726 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms