RNA–Protein interactions for RNA: ENST00000558631.1

APH1B-204, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-204ENST00000558631 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
APH1B-204ENST00000558631 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
APH1B-204ENST00000558631 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
APH1B-204ENST00000558631 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
APH1B-204ENST00000558631 A1BGP04217 495 aa11.64□□□□□ -0.55
APH1B-204ENST00000558631 KCNA4P22459 653 aa11.64□□□□□ -0.55
APH1B-204ENST00000558631 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
APH1B-204ENST00000558631 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
APH1B-204ENST00000558631 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
APH1B-204ENST00000558631 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
APH1B-204ENST00000558631 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
APH1B-204ENST00000558631 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
APH1B-204ENST00000558631 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
APH1B-204ENST00000558631 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
APH1B-204ENST00000558631 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
APH1B-204ENST00000558631 USP16Q9Y5T5 823 aa11.63□□□□□ -0.55
APH1B-204ENST00000558631 STARD3NLO95772 234 aa11.62□□□□□ -0.55
APH1B-204ENST00000558631 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
APH1B-204ENST00000558631 MYL6BP14649 208 aa11.62□□□□□ -0.55
APH1B-204ENST00000558631 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
APH1B-204ENST00000558631 COL15A1P39059 1388 aa11.62□□□□□ -0.55
APH1B-204ENST00000558631 LRP5O75197 1615 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 RPS6KA4O75676 772 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 ANXA1P04083 346 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 SSFA2P28290 1259 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 RFC4P35249 363 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
APH1B-204ENST00000558631 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
APH1B-204ENST00000558631 TRAPPC3LQ5T215 181 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
APH1B-204ENST00000558631 SPON1Q9HCB6 807 aa11.61□□□□□ -0.55
APH1B-204ENST00000558631 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
APH1B-204ENST00000558631 SCN7AQ01118 1682 aa11.6□□□□□ -0.55
APH1B-204ENST00000558631 CHL1O00533 1208 aa11.6□□□□□ -0.55
APH1B-204ENST00000558631 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
APH1B-204ENST00000558631 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
APH1B-204ENST00000558631 GNAI1P63096 354 aa11.6□□□□□ -0.55
APH1B-204ENST00000558631 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
APH1B-204ENST00000558631 IFT57Q9NWB7 429 aa11.6□□□□□ -0.55
APH1B-204ENST00000558631 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
APH1B-204ENST00000558631 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
APH1B-204ENST00000558631 MTFR1LQ9H019 292 aa11.59□□□□□ -0.55
APH1B-204ENST00000558631 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
APH1B-204ENST00000558631 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
APH1B-204ENST00000558631 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
APH1B-204ENST00000558631 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 PROSER3Q2NL68 480 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
APH1B-204ENST00000558631 BICDL1Q6ZP65 573 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 NPM2Q86SE8 214 aaKnown RBP11.58□□□□□ -0.56
APH1B-204ENST00000558631 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 TEX13AQ9BXU3 409 aaPredicted RBP11.58□□□□□ -0.56
APH1B-204ENST00000558631 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
APH1B-204ENST00000558631 ZPR1O75312 459 aa11.57□□□□□ -0.56
APH1B-204ENST00000558631 ZNF853P0CG23 659 aa11.57□□□□□ -0.56
APH1B-204ENST00000558631 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
APH1B-204ENST00000558631 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
APH1B-204ENST00000558631 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
APH1B-204ENST00000558631 USP42Q9H9J4 1324 aaKnown RBP11.57□□□□□ -0.56
APH1B-204ENST00000558631 MMP10P09238 476 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 POLD1P28340 1107 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 PTGER2P43116 358 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
APH1B-204ENST00000558631 FKBP8Q14318 412 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
APH1B-204ENST00000558631 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 CHPF2Q9P2E5 772 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
APH1B-204ENST00000558631 GYS1P13807 737 aa11.55□□□□□ -0.56
APH1B-204ENST00000558631 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
APH1B-204ENST00000558631 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
APH1B-204ENST00000558631 EXOSC9Q06265 439 aaKnown RBP11.55□□□□□ -0.56
APH1B-204ENST00000558631 YTHDC1Q96MU7 727 aaKnown RBP11.55□□□□□ -0.56
APH1B-204ENST00000558631 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
APH1B-204ENST00000558631 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
APH1B-204ENST00000558631 FAM177BA6PVY3 158 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 IL6STP40189 918 aaPredicted RBP11.54□□□□□ -0.56
APH1B-204ENST00000558631 TTLL7Q6ZT98 887 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 MYH16Q9H6N6 1097 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 IL16Q14005 1332 aa11.54□□□□□ -0.56
APH1B-204ENST00000558631 A0A087WZG4 1122 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
APH1B-204ENST00000558631 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
APH1B-204ENST00000558631 NARFQ9UHQ1 456 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
APH1B-204ENST00000558631 SRCAPQ6ZRS2 3230 aa11.52□□□□□ -0.57
APH1B-204ENST00000558631 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
APH1B-204ENST00000558631 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms