RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 NF2P35240 595 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 CCDC85AQ96PX6 553 aaPredicted RBP13.12□□□□□ -0.31
INO80-205ENST00000558357 TDRD12Q587J7 1177 aaKnown RBP13.11□□□□□ -0.31
INO80-205ENST00000558357 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 CCDC150Q8NCX0 1101 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 ZNF652Q9Y2D9 606 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 MAP3K12Q12852 859 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
INO80-205ENST00000558357 CTNNBL1Q8WYA6 563 aaPredicted RBP13.11□□□□□ -0.31
INO80-205ENST00000558357 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
INO80-205ENST00000558357 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
INO80-205ENST00000558357 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
INO80-205ENST00000558357 CCDC175P0C221 793 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
INO80-205ENST00000558357 CFTRP13569 1480 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
INO80-205ENST00000558357 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
INO80-205ENST00000558357 CUL5Q93034 780 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
INO80-205ENST00000558357 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
INO80-205ENST00000558357 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 ABCC11Q96J66 1382 aa13.1□□□□□ -0.31
INO80-205ENST00000558357 ZNF213O14771 459 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
INO80-205ENST00000558357 CETN1Q12798 172 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 STX1AQ16623 288 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 NESP48681 1621 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 MCM5P33992 734 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
INO80-205ENST00000558357 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 EHMT1Q9H9B1 1298 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
INO80-205ENST00000558357 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.31
INO80-205ENST00000558357 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.31
INO80-205ENST00000558357 GOLGA8BA8MQT2 603 aa13.08□□□□□ -0.31
INO80-205ENST00000558357 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.31
INO80-205ENST00000558357 UBE4AQ14139 1066 aa13.08□□□□□ -0.31
INO80-205ENST00000558357 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.31
INO80-205ENST00000558357 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.31
INO80-205ENST00000558357 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.31
INO80-205ENST00000558357 CPLX3Q8WVH0 158 aa13.08□□□□□ -0.31
INO80-205ENST00000558357 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 PPM1EQ8WY54 764 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 PYM1Q9BRP8 204 aaKnown RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 A0A087WZG4 1122 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 DNA2P51530 1060 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 NLRP5P59047 1200 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 AMPD3Q01432 767 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 DZIP1Q86YF9 867 aaKnown RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 CEP63Q96MT8 703 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 CTNNA2P26232 953 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
INO80-205ENST00000558357 C16orf45Q96MC5 204 aaPredicted RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 TRMT1Q9NXH9 659 aaKnown RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
INO80-205ENST00000558357 SSFA2P28290 1259 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 FAM114A1Q8IWE2 563 aa13.08□□□□□ -0.32
INO80-205ENST00000558357 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 MYD88Q99836 296 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 SLC5A1P13866 664 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
INO80-205ENST00000558357 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
INO80-205ENST00000558357 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
INO80-205ENST00000558357 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
INO80-205ENST00000558357 CATIPQ7Z7H3 387 aa13.07□□□□□ -0.32
INO80-205ENST00000558357 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
INO80-205ENST00000558357 MCM10Q7L590 875 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 CAVIN2O95810 425 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
INO80-205ENST00000558357 CCDC12Q8WUD4 166 aaPredicted RBP13.06□□□□□ -0.32
INO80-205ENST00000558357 CALML4Q96GE6 196 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 SSH1Q8WYL5 1049 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 PRDM10Q9NQV6 1147 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 KANK3Q6NY19 840 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
INO80-205ENST00000558357 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
INO80-205ENST00000558357 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
INO80-205ENST00000558357 SNW1Q13573 536 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms