RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 RTF1Q92541 710 aaKnown RBP10.28□□□□□ -0.76
RTF1-205ENST00000558298 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
RTF1-205ENST00000558298 SSFA2P28290 1259 aa10.27□□□□□ -0.77
RTF1-205ENST00000558298 TEFQ10587 303 aa10.27□□□□□ -0.77
RTF1-205ENST00000558298 CCDC27Q2M243 656 aa10.27□□□□□ -0.77
RTF1-205ENST00000558298 RC3H1Q5TC82 1133 aaKnown RBP10.27□□□□□ -0.77
RTF1-205ENST00000558298 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
RTF1-205ENST00000558298 ADRA2BP18089 450 aa10.26□□□□□ -0.77
RTF1-205ENST00000558298 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
RTF1-205ENST00000558298 ZNF790Q6PG37 636 aa10.26□□□□□ -0.77
RTF1-205ENST00000558298 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
RTF1-205ENST00000558298 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
RTF1-205ENST00000558298 UTRNP46939 3433 aa10.26□□□□□ -0.77
RTF1-205ENST00000558298 SCN7AQ01118 1682 aa10.25□□□□□ -0.77
RTF1-205ENST00000558298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
RTF1-205ENST00000558298 CCDC184Q52MB2 194 aa10.25□□□□□ -0.77
RTF1-205ENST00000558298 AK7Q96M32 723 aa10.25□□□□□ -0.77
RTF1-205ENST00000558298 ARXQ96QS3 562 aa10.25□□□□□ -0.77
RTF1-205ENST00000558298 SYT17Q9BSW7 474 aa10.25□□□□□ -0.77
RTF1-205ENST00000558298 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
RTF1-205ENST00000558298 BCORQ6W2J9 1755 aa10.24□□□□□ -0.77
RTF1-205ENST00000558298 TAF7Q15545 349 aaPredicted RBP10.24□□□□□ -0.77
RTF1-205ENST00000558298 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
RTF1-205ENST00000558298 SMIM5Q71RC9 77 aa10.24□□□□□ -0.77
RTF1-205ENST00000558298 TEX13AQ9BXU3 409 aaPredicted RBP10.24□□□□□ -0.77
RTF1-205ENST00000558298 BTBD11A6QL63 1104 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 RGL2O15211 777 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 GNPATO15228 680 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 RIPK4P57078 832 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
RTF1-205ENST00000558298 MCM10Q7L590 875 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 TTC5Q8N0Z6 440 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 FMNL2Q96PY5 1086 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 PPP1R1BQ9UD71 204 aaPredicted RBP10.23□□□□□ -0.77
RTF1-205ENST00000558298 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 NRXN2Q9P2S2 1712 aa10.23□□□□□ -0.77
RTF1-205ENST00000558298 GOLGB1Q14789 3259 aaKnown RBP10.23□□□□□ -0.77
RTF1-205ENST00000558298 BRCA1P38398 1863 aaKnown RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 EIF5BO60841 1220 aaKnown RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
RTF1-205ENST00000558298 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 SLC39A6Q13433 755 aa10.22□□□□□ -0.77
RTF1-205ENST00000558298 INTS5Q6P9B9 1019 aaKnown RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 ZNF496Q96IT1 587 aaPredicted RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
RTF1-205ENST00000558298 CACNA1FO60840 1977 aa10.22□□□□□ -0.77
RTF1-205ENST00000558298 IL16Q14005 1332 aa10.22□□□□□ -0.77
RTF1-205ENST00000558298 ERBB4Q15303 1308 aa10.22□□□□□ -0.77
RTF1-205ENST00000558298 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.77
RTF1-205ENST00000558298 HOXB7P09629 217 aa10.21□□□□□ -0.77
RTF1-205ENST00000558298 ZNF853P0CG23 659 aa10.21□□□□□ -0.77
RTF1-205ENST00000558298 CYP19A1P11511 503 aaPredicted RBP10.21□□□□□ -0.77
RTF1-205ENST00000558298 L1TD1Q5T7N2 865 aaKnown RBP10.21□□□□□ -0.77
RTF1-205ENST00000558298 DNAJC10Q8IXB1 793 aa10.21□□□□□ -0.77
RTF1-205ENST00000558298 PKNOX2Q96KN3 472 aa10.21□□□□□ -0.77
RTF1-205ENST00000558298 SOS1Q07889 1333 aaPredicted RBP10.21□□□□□ -0.78
RTF1-205ENST00000558298 C10orf71Q711Q0 1435 aa10.21□□□□□ -0.78
RTF1-205ENST00000558298 CHL1O00533 1208 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 APAF1O14727 1248 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 PHF14O94880 888 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 POLD1P28340 1107 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 DCTN1Q14203 1278 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 CCDC146Q8IYE0 955 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 IL27Q8NEV9 243 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
RTF1-205ENST00000558298 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
RTF1-205ENST00000558298 USP42Q9H9J4 1324 aaKnown RBP10.2□□□□□ -0.78
RTF1-205ENST00000558298 CHD4Q14839 1912 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 STARD3NLO95772 234 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
RTF1-205ENST00000558298 GYS1P13807 737 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 EIF4A1P60842 406 aaKnown RBP10.19□□□□□ -0.78
RTF1-205ENST00000558298 NLGN2Q8NFZ4 835 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
RTF1-205ENST00000558298 RTCBQ9Y3I0 505 aaKnown RBP10.19□□□□□ -0.78
RTF1-205ENST00000558298 AFDNP55196 1824 aaKnown RBP10.19□□□□□ -0.78
RTF1-205ENST00000558298 COL15A1P39059 1388 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 ZNF521Q96K83 1311 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
RTF1-205ENST00000558298 IL6STP40189 918 aaPredicted RBP10.18□□□□□ -0.78
RTF1-205ENST00000558298 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
RTF1-205ENST00000558298 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 ZBTB1Q9Y2K1 713 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 CD2APQ9Y5K6 639 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 DLEC1Q9Y238 1755 aa10.18□□□□□ -0.78
RTF1-205ENST00000558298 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
RTF1-205ENST00000558298 KCNQ3O43525 872 aa10.17□□□□□ -0.78
RTF1-205ENST00000558298 RRP9O43818 475 aaKnown RBP10.17□□□□□ -0.78
RTF1-205ENST00000558298 IRX6P78412 446 aaPredicted RBP10.17□□□□□ -0.78
RTF1-205ENST00000558298 TRAPPC3LQ5T215 181 aa10.17□□□□□ -0.78
RTF1-205ENST00000558298 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
RTF1-205ENST00000558298 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
RTF1-205ENST00000558298 N4BP2Q86UW6 1770 aaPredicted RBP10.16□□□□□ -0.78
RTF1-205ENST00000558298 GNAI1P63096 354 aa10.16□□□□□ -0.78
RTF1-205ENST00000558298 WDR63Q8IWG1 891 aa10.16□□□□□ -0.78
RTF1-205ENST00000558298 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
RTF1-205ENST00000558298 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
RTF1-205ENST00000558298 ANKRD36CQ5JPF3 1778 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms