RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
CSHL1-207ENST00000558099 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
CSHL1-207ENST00000558099 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
CSHL1-207ENST00000558099 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
CSHL1-207ENST00000558099 CYP19A1P11511 503 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-207ENST00000558099 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
CSHL1-207ENST00000558099 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
CSHL1-207ENST00000558099 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
CSHL1-207ENST00000558099 FCHSD2O94868 740 aa17.48■□□□□ 0.39
CSHL1-207ENST00000558099 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
CSHL1-207ENST00000558099 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
CSHL1-207ENST00000558099 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
CSHL1-207ENST00000558099 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
CSHL1-207ENST00000558099 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
CSHL1-207ENST00000558099 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
CSHL1-207ENST00000558099 MMP10P09238 476 aa17.45■□□□□ 0.38
CSHL1-207ENST00000558099 KIF13BQ9NQT8 1826 aa17.45■□□□□ 0.38
CSHL1-207ENST00000558099 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
CSHL1-207ENST00000558099 USP42Q9H9J4 1324 aaKnown RBP17.45■□□□□ 0.38
CSHL1-207ENST00000558099 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
CSHL1-207ENST00000558099 GPR162Q16538 588 aa17.44■□□□□ 0.38
CSHL1-207ENST00000558099 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
CSHL1-207ENST00000558099 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
CSHL1-207ENST00000558099 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
CSHL1-207ENST00000558099 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
CSHL1-207ENST00000558099 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
CSHL1-207ENST00000558099 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
CSHL1-207ENST00000558099 CHD4Q14839 1912 aa17.43■□□□□ 0.38
CSHL1-207ENST00000558099 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
CSHL1-207ENST00000558099 TM4SF1P30408 202 aa17.42■□□□□ 0.38
CSHL1-207ENST00000558099 RFC4P35249 363 aa17.42■□□□□ 0.38
CSHL1-207ENST00000558099 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
CSHL1-207ENST00000558099 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
CSHL1-207ENST00000558099 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
CSHL1-207ENST00000558099 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
CSHL1-207ENST00000558099 ZBTB1Q9Y2K1 713 aa17.41■□□□□ 0.38
CSHL1-207ENST00000558099 PXDNLA1KZ92 1463 aa17.41■□□□□ 0.38
CSHL1-207ENST00000558099 HEG1Q9ULI3 1381 aa17.41■□□□□ 0.38
CSHL1-207ENST00000558099 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
CSHL1-207ENST00000558099 DDR1Q08345 913 aa17.4■□□□□ 0.38
CSHL1-207ENST00000558099 KCNQ3O43525 872 aa17.4■□□□□ 0.38
CSHL1-207ENST00000558099 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
CSHL1-207ENST00000558099 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
CSHL1-207ENST00000558099 TEFQ10587 303 aa17.39■□□□□ 0.37
CSHL1-207ENST00000558099 NARFQ9UHQ1 456 aa17.39■□□□□ 0.37
CSHL1-207ENST00000558099 KCNA3P22001 575 aa17.38■□□□□ 0.37
CSHL1-207ENST00000558099 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
CSHL1-207ENST00000558099 TGFB2P61812 414 aa17.38■□□□□ 0.37
CSHL1-207ENST00000558099 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
CSHL1-207ENST00000558099 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSHL1-207ENST00000558099 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
CSHL1-207ENST00000558099 COL15A1P39059 1388 aa17.37■□□□□ 0.37
CSHL1-207ENST00000558099 PDE4AP27815 886 aa17.36■□□□□ 0.37
CSHL1-207ENST00000558099 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
CSHL1-207ENST00000558099 MCM10Q7L590 875 aa17.36■□□□□ 0.37
CSHL1-207ENST00000558099 ADCY9O60503 1353 aa17.36■□□□□ 0.37
CSHL1-207ENST00000558099 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
CSHL1-207ENST00000558099 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
CSHL1-207ENST00000558099 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
CSHL1-207ENST00000558099 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
CSHL1-207ENST00000558099 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
CSHL1-207ENST00000558099 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
CSHL1-207ENST00000558099 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
CSHL1-207ENST00000558099 STARD3NLO95772 234 aa17.33■□□□□ 0.37
CSHL1-207ENST00000558099 NFIXQ14938 502 aa17.33■□□□□ 0.37
CSHL1-207ENST00000558099 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.37
CSHL1-207ENST00000558099 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 DPEP1P16444 411 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 IL6STP40189 918 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-207ENST00000558099 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 BRCA1P38398 1863 aaKnown RBP17.32■□□□□ 0.36
CSHL1-207ENST00000558099 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 NEFMP07197 916 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
CSHL1-207ENST00000558099 A1BGP04217 495 aa17.31■□□□□ 0.36
CSHL1-207ENST00000558099 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
CSHL1-207ENST00000558099 N4BP2Q86UW6 1770 aaPredicted RBP17.31■□□□□ 0.36
CSHL1-207ENST00000558099 ZPR1O75312 459 aa17.3■□□□□ 0.36
CSHL1-207ENST00000558099 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
CSHL1-207ENST00000558099 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
CSHL1-207ENST00000558099 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
CSHL1-207ENST00000558099 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
CSHL1-207ENST00000558099 A0A087WZG4 1122 aa17.28■□□□□ 0.36
CSHL1-207ENST00000558099 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
CSHL1-207ENST00000558099 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
CSHL1-207ENST00000558099 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
CSHL1-207ENST00000558099 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
CSHL1-207ENST00000558099 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
CSHL1-207ENST00000558099 SCN7AQ01118 1682 aa17.27■□□□□ 0.36
CSHL1-207ENST00000558099 AFDNP55196 1824 aaKnown RBP17.27■□□□□ 0.36
CSHL1-207ENST00000558099 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.35
CSHL1-207ENST00000558099 SERPINB2P05120 415 aa17.26■□□□□ 0.35
CSHL1-207ENST00000558099 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
CSHL1-207ENST00000558099 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
CSHL1-207ENST00000558099 RGL2O15211 777 aa17.25■□□□□ 0.35
CSHL1-207ENST00000558099 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
CSHL1-207ENST00000558099 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
CSHL1-207ENST00000558099 MIS18AQ9NYP9 233 aa17.25■□□□□ 0.35
CSHL1-207ENST00000558099 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
CSHL1-207ENST00000558099 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms