RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PARP3Q9Y6F1 533 aa6.42□□□□□ -1.38
GPHN-216ENST00000557678 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 DCDC2BA2VCK2 349 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
GPHN-216ENST00000557678 ATXN7O15265 892 aaPredicted RBP6.41□□□□□ -1.38
GPHN-216ENST00000557678 CTBSQ01459 385 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 KRTAP1-3Q8IUG1 177 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
GPHN-216ENST00000557678 EDARADDQ8WWZ3 215 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 ZCCHC2Q9C0B9 1178 aaKnown RBP6.41□□□□□ -1.38
GPHN-216ENST00000557678 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 ALG2Q9H553 416 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 PCDHGC4Q9Y5F7 938 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 PCDHGA11Q9Y5H2 935 aa6.41□□□□□ -1.38
GPHN-216ENST00000557678 USP17L5A8MUK1 530 aa6.4□□□□□ -1.38
GPHN-216ENST00000557678 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.38
GPHN-216ENST00000557678 ATP4AP20648 1035 aa6.4□□□□□ -1.38
GPHN-216ENST00000557678 GGA1Q9UJY5 639 aa6.4□□□□□ -1.38
GPHN-216ENST00000557678 ZNF232Q9UNY5 417 aa6.4□□□□□ -1.38
GPHN-216ENST00000557678 POM121CA8CG34 1229 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 SHISA8B8ZZ34 492 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 FOXK2Q01167 660 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 UBAP2LQ14157 1087 aaKnown RBP6.39□□□□□ -1.39
GPHN-216ENST00000557678 PLA2G4EQ3MJ16 856 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 TBCELQ5QJ74 424 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 HDGFL1Q5TGJ6 251 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 NFATC2IPQ8NCF5 419 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 PSMG3-AS1Q96PY0 264 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 SLC4A9Q96Q91 983 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 NEUROD4Q9HD90 331 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 LRRC4BQ9NT99 713 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 MKL2Q9ULH7 1088 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 USP3Q9Y6I4 520 aa6.39□□□□□ -1.39
GPHN-216ENST00000557678 NEURL1BA8MQ27 555 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 IGHA1P01876 353 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 PROCP04070 461 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 CD33P20138 364 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 SNRPNP63162 240 aaKnown RBP6.38□□□□□ -1.39
GPHN-216ENST00000557678 MTFR1Q15390 333 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 ZNF358Q9NW07 568 aa6.38□□□□□ -1.39
GPHN-216ENST00000557678 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
GPHN-216ENST00000557678 C2CD2LO14523 706 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 ATP1A2P50993 1020 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 C1orf229Q6ZS94 237 aaPredicted RBP6.37□□□□□ -1.39
GPHN-216ENST00000557678 TNS4Q8IZW8 715 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 TPCN2Q8NHX9 752 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 ZIC5Q96T25 663 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 NDFIP2Q9NV92 336 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 DNAAF2Q9NVR5 837 aaKnown RBP6.37□□□□□ -1.39
GPHN-216ENST00000557678 ZDHHC3Q9NYG2 299 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 PRR12Q9ULL5 1215 aa6.37□□□□□ -1.39
GPHN-216ENST00000557678 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
GPHN-216ENST00000557678 USP17L3A6NCW0 530 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 USP17L4A6NCW7 530 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 MAPTP10636 758 aaKnown RBP6.36□□□□□ -1.39
GPHN-216ENST00000557678 TXLNAP40222 546 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 GRIN2CQ14957 1233 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 SLCO4C1Q6ZQN7 724 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 USP17L1Q7RTZ2 530 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 SLC9A9Q8IVB4 645 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 L3MBTL2Q969R5 705 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 SCHIP1Q9P0W5 487 aaPredicted RBP6.36□□□□□ -1.39
GPHN-216ENST00000557678 CHMP3Q9Y3E7 222 aa6.36□□□□□ -1.39
GPHN-216ENST00000557678 MSTNO14793 375 aa6.35□□□□□ -1.39
GPHN-216ENST00000557678 ARAFP10398 606 aa6.35□□□□□ -1.39
GPHN-216ENST00000557678 TNP2Q05952 138 aa6.35□□□□□ -1.39
GPHN-216ENST00000557678 CCDC102BQ68D86 513 aa6.35□□□□□ -1.39
GPHN-216ENST00000557678 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 ATP9BO43861 1147 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 ADH6P28332 368 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 NOS2P35228 1153 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 PCBP4P57723 403 aaKnown RBP6.34□□□□□ -1.39
GPHN-216ENST00000557678 LRRC69Q6ZNQ3 347 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 Q8N3U1 123 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 ADAMTS19Q8TE59 1207 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 CLUAP1Q96AJ1 413 aa6.34□□□□□ -1.39
GPHN-216ENST00000557678 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
GPHN-216ENST00000557678 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.39
GPHN-216ENST00000557678 PIK3R2O00459 728 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 EPXP11678 715 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 OGFOD1Q8N543 542 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 RHPN1Q8TCX5 695 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 ZDHHC1Q8WTX9 485 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 BTBD6Q96KE9 485 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 MARK1Q9P0L2 795 aa6.33□□□□□ -1.4
GPHN-216ENST00000557678 FAM157BP0CG42 384 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 TEAD4Q15561 434 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 PLEKHM2Q8IWE5 1019 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 ZNF295-AS1Q8N0V1 137 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
GPHN-216ENST00000557678 PALM3A6NDB9 673 aaPredicted RBP6.31□□□□□ -1.4
GPHN-216ENST00000557678 CLDN10P78369 228 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms