RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 PLSCR1O15162 318 aa11.59□□□□□ -0.55
RD3L-201ENST00000557640 PACS2Q86VP3 889 aa11.59□□□□□ -0.55
RD3L-201ENST00000557640 DOT1LQ8TEK3 1739 aa11.59□□□□□ -0.55
RD3L-201ENST00000557640 WDR17Q8IZU2 1322 aa11.59□□□□□ -0.55
RD3L-201ENST00000557640 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
RD3L-201ENST00000557640 ZNF784Q8NCA9 323 aaPredicted RBP11.58□□□□□ -0.56
RD3L-201ENST00000557640 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
RD3L-201ENST00000557640 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
RD3L-201ENST00000557640 BRD4O60885 1362 aaPredicted RBP11.57□□□□□ -0.56
RD3L-201ENST00000557640 CEP350Q5VT06 3117 aa11.57□□□□□ -0.56
RD3L-201ENST00000557640 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
RD3L-201ENST00000557640 DDB1Q16531 1140 aa11.57□□□□□ -0.56
RD3L-201ENST00000557640 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
RD3L-201ENST00000557640 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
RD3L-201ENST00000557640 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
RD3L-201ENST00000557640 LY75O60449 1722 aa11.56□□□□□ -0.56
RD3L-201ENST00000557640 FHDC1Q9C0D6 1143 aaPredicted RBP11.56□□□□□ -0.56
RD3L-201ENST00000557640 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
RD3L-201ENST00000557640 DPYSL4O14531 572 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 TXNRD1Q16881 649 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 TOM1L2Q6ZVM7 507 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 DDX12PQ92771 950 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 CD163L1Q9NR16 1453 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 KAT6BQ8WYB5 2073 aa11.55□□□□□ -0.56
RD3L-201ENST00000557640 ZNF827Q17R98 1081 aa11.54□□□□□ -0.56
RD3L-201ENST00000557640 ARHGEF25Q86VW2 580 aa11.54□□□□□ -0.56
RD3L-201ENST00000557640 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
RD3L-201ENST00000557640 SLC15A2Q16348 729 aa11.53□□□□□ -0.56
RD3L-201ENST00000557640 SYT17Q9BSW7 474 aa11.53□□□□□ -0.56
RD3L-201ENST00000557640 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
RD3L-201ENST00000557640 TTC21BQ7Z4L5 1316 aa11.53□□□□□ -0.56
RD3L-201ENST00000557640 MTRQ99707 1265 aa11.52□□□□□ -0.57
RD3L-201ENST00000557640 CARD10Q9BWT7 1032 aa11.52□□□□□ -0.57
RD3L-201ENST00000557640 IL21Q9HBE4 155 aa11.52□□□□□ -0.57
RD3L-201ENST00000557640 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
RD3L-201ENST00000557640 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
RD3L-201ENST00000557640 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
RD3L-201ENST00000557640 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
RD3L-201ENST00000557640 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
RD3L-201ENST00000557640 TOGARAM1Q9Y4F4 1720 aa11.5□□□□□ -0.57
RD3L-201ENST00000557640 MTFR1LQ9H019 292 aa11.5□□□□□ -0.57
RD3L-201ENST00000557640 LRRC4BQ9NT99 713 aa11.5□□□□□ -0.57
RD3L-201ENST00000557640 STK32BQ9NY57 414 aa11.5□□□□□ -0.57
RD3L-201ENST00000557640 CCDC7Q96M83 1385 aa11.5□□□□□ -0.57
RD3L-201ENST00000557640 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
RD3L-201ENST00000557640 SMAPO00193 183 aa11.49□□□□□ -0.57
RD3L-201ENST00000557640 MAP3K7O43318 606 aa11.49□□□□□ -0.57
RD3L-201ENST00000557640 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.49□□□□□ -0.57
RD3L-201ENST00000557640 C5P01031 1676 aa11.49□□□□□ -0.57
RD3L-201ENST00000557640 SENP3-EIF4A1A0A087X0R7 540 aa11.48□□□□□ -0.57
RD3L-201ENST00000557640 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
RD3L-201ENST00000557640 NSD2O96028 1365 aa11.48□□□□□ -0.57
RD3L-201ENST00000557640 SBNO2Q9Y2G9 1366 aa11.48□□□□□ -0.57
RD3L-201ENST00000557640 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
RD3L-201ENST00000557640 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
RD3L-201ENST00000557640 NBR1Q14596 966 aa11.47□□□□□ -0.57
RD3L-201ENST00000557640 CDCA7Q9BWT1 371 aaPredicted RBP11.47□□□□□ -0.57
RD3L-201ENST00000557640 USP31Q70CQ4 1352 aa11.46□□□□□ -0.57
RD3L-201ENST00000557640 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.57
RD3L-201ENST00000557640 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
RD3L-201ENST00000557640 C1QTNF8P60827 252 aa11.46□□□□□ -0.57
RD3L-201ENST00000557640 ZNF516Q92618 1163 aa11.46□□□□□ -0.57
RD3L-201ENST00000557640 ARXQ96QS3 562 aa11.46□□□□□ -0.57
RD3L-201ENST00000557640 PNPLA7Q6ZV29 1317 aa11.45□□□□□ -0.58
RD3L-201ENST00000557640 EVC2Q86UK5 1308 aa11.45□□□□□ -0.58
RD3L-201ENST00000557640 NME9Q86XW9 330 aa11.45□□□□□ -0.58
RD3L-201ENST00000557640 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
RD3L-201ENST00000557640 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
RD3L-201ENST00000557640 MEGF6O75095 1541 aa11.45□□□□□ -0.58
RD3L-201ENST00000557640 EXOC5O00471 708 aa11.44□□□□□ -0.58
RD3L-201ENST00000557640 RNF40O75150 1001 aa11.44□□□□□ -0.58
RD3L-201ENST00000557640 KCNQ4P56696 695 aa11.44□□□□□ -0.58
RD3L-201ENST00000557640 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
RD3L-201ENST00000557640 CDCA7LQ96GN5 454 aa11.44□□□□□ -0.58
RD3L-201ENST00000557640 KCNH5Q8NCM2 988 aa11.43□□□□□ -0.58
RD3L-201ENST00000557640 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
RD3L-201ENST00000557640 ITGB4P16144 1822 aa11.42□□□□□ -0.58
RD3L-201ENST00000557640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.58
RD3L-201ENST00000557640 UBR3Q6ZT12 1888 aa11.42□□□□□ -0.58
RD3L-201ENST00000557640 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 IL2RBP14784 551 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 YBX3P16989 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
RD3L-201ENST00000557640 PRSS12P56730 875 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 NLRP2Q9NX02 1062 aa11.41□□□□□ -0.58
RD3L-201ENST00000557640 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
RD3L-201ENST00000557640 GGCXP38435 758 aa11.4□□□□□ -0.58
RD3L-201ENST00000557640 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
RD3L-201ENST00000557640 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
RD3L-201ENST00000557640 PKD1L3Q7Z443 1732 aa11.4□□□□□ -0.58
RD3L-201ENST00000557640 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
RD3L-201ENST00000557640 KIF20BQ96Q89 1820 aa11.39□□□□□ -0.59
RD3L-201ENST00000557640 TATDN2Q93075 761 aa11.39□□□□□ -0.59
RD3L-201ENST00000557640 SIN3AQ96ST3 1273 aa11.39□□□□□ -0.59
RD3L-201ENST00000557640 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
RD3L-201ENST00000557640 ATP10DQ9P241 1426 aa11.38□□□□□ -0.59
RD3L-201ENST00000557640 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
RD3L-201ENST00000557640 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms