RNA–Protein interactions for RNA: ENST00000557459.1

NFKBIA-210, Transcript of NFKB inhibitor alpha, humanhuman

TSL 2

Gene NFKBIA, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-210ENST00000557459 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
NFKBIA-210ENST00000557459 AMIGO3Q86WK7 504 aa20.86■□□□□ 0.93
NFKBIA-210ENST00000557459 TTC5Q8N0Z6 440 aa20.86■□□□□ 0.93
NFKBIA-210ENST00000557459 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
NFKBIA-210ENST00000557459 C5P01031 1676 aa20.86■□□□□ 0.93
NFKBIA-210ENST00000557459 ADCY9O60503 1353 aa20.85■□□□□ 0.93
NFKBIA-210ENST00000557459 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
NFKBIA-210ENST00000557459 HSPA6P17066 643 aa20.85■□□□□ 0.93
NFKBIA-210ENST00000557459 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
NFKBIA-210ENST00000557459 ZNF853P0CG23 659 aa20.84■□□□□ 0.93
NFKBIA-210ENST00000557459 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
NFKBIA-210ENST00000557459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.83■□□□□ 0.93
NFKBIA-210ENST00000557459 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
NFKBIA-210ENST00000557459 KCNQ3O43525 872 aa20.82■□□□□ 0.92
NFKBIA-210ENST00000557459 PTCD1O75127 700 aaKnown RBP20.82■□□□□ 0.92
NFKBIA-210ENST00000557459 RBM42Q9BTD8 480 aaKnown RBP20.82■□□□□ 0.92
NFKBIA-210ENST00000557459 LOC102724428A0A0B4J2F2 783 aa20.81■□□□□ 0.92
NFKBIA-210ENST00000557459 SIK1P57059 783 aa20.81■□□□□ 0.92
NFKBIA-210ENST00000557459 FMNL2Q96PY5 1086 aa20.81■□□□□ 0.92
NFKBIA-210ENST00000557459 SIPA1L3O60292 1781 aaPredicted RBP20.8■□□□□ 0.92
NFKBIA-210ENST00000557459 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
NFKBIA-210ENST00000557459 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
NFKBIA-210ENST00000557459 MBIPQ9NS73 344 aa20.8■□□□□ 0.92
NFKBIA-210ENST00000557459 C4BP0C0L5 1744 aa20.8■□□□□ 0.92
NFKBIA-210ENST00000557459 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
NFKBIA-210ENST00000557459 SSFA2P28290 1259 aa20.79■□□□□ 0.92
NFKBIA-210ENST00000557459 E9PSI1 815 aa20.78■□□□□ 0.92
NFKBIA-210ENST00000557459 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
NFKBIA-210ENST00000557459 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
NFKBIA-210ENST00000557459 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
NFKBIA-210ENST00000557459 ATP6V1AP38606 617 aa20.77■□□□□ 0.92
NFKBIA-210ENST00000557459 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
NFKBIA-210ENST00000557459 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
NFKBIA-210ENST00000557459 SLFN5Q08AF3 891 aa20.76■□□□□ 0.91
NFKBIA-210ENST00000557459 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
NFKBIA-210ENST00000557459 HEG1Q9ULI3 1381 aa20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 KIF3CO14782 793 aa20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 GNPATO15228 680 aa20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
NFKBIA-210ENST00000557459 CDCA7LQ96GN5 454 aa20.74■□□□□ 0.91
NFKBIA-210ENST00000557459 FANCIQ9NVI1 1328 aa20.74■□□□□ 0.91
NFKBIA-210ENST00000557459 KCPQ6ZWJ8 1503 aa20.73■□□□□ 0.91
NFKBIA-210ENST00000557459 ITPK1Q13572 414 aa20.73■□□□□ 0.91
NFKBIA-210ENST00000557459 MMP10P09238 476 aa20.72■□□□□ 0.91
NFKBIA-210ENST00000557459 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
NFKBIA-210ENST00000557459 TRMT2AQ8IZ69 625 aaKnown RBP20.72■□□□□ 0.91
NFKBIA-210ENST00000557459 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
NFKBIA-210ENST00000557459 STARD3NLO95772 234 aa20.71■□□□□ 0.91
NFKBIA-210ENST00000557459 KDM3BQ7LBC6 1761 aa20.71■□□□□ 0.91
NFKBIA-210ENST00000557459 HOXB7P09629 217 aa20.7■□□□□ 0.9
NFKBIA-210ENST00000557459 DUSP27Q5VZP5 1158 aa20.7■□□□□ 0.9
NFKBIA-210ENST00000557459 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 CHMP4AQ9BY43 222 aa20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 SOS1Q07889 1333 aaPredicted RBP20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 UBR2Q8IWV8 1755 aa20.69■□□□□ 0.9
NFKBIA-210ENST00000557459 CYP19A1P11511 503 aaPredicted RBP20.68■□□□□ 0.9
NFKBIA-210ENST00000557459 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
NFKBIA-210ENST00000557459 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
NFKBIA-210ENST00000557459 A0A0G2JLW4 131 aa20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 APLP1P51693 650 aa20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 RC3H1Q5TC82 1133 aaKnown RBP20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
NFKBIA-210ENST00000557459 TGFB2P61812 414 aa20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 RTCBQ9Y3I0 505 aaKnown RBP20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 ZNF831Q5JPB2 1677 aa20.66■□□□□ 0.9
NFKBIA-210ENST00000557459 CNTNAP4Q9C0A0 1308 aa20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 TOMM70O94826 608 aa20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 EIF2S2P20042 333 aaKnown RBP20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 NLGN1Q8N2Q7 840 aa20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 TSPYL6Q8N831 410 aa20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
NFKBIA-210ENST00000557459 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.89
NFKBIA-210ENST00000557459 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
NFKBIA-210ENST00000557459 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
NFKBIA-210ENST00000557459 VAMP4O75379 141 aa20.62■□□□□ 0.89
NFKBIA-210ENST00000557459 A1BGP04217 495 aa20.62■□□□□ 0.89
NFKBIA-210ENST00000557459 DPEP1P16444 411 aa20.62■□□□□ 0.89
NFKBIA-210ENST00000557459 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
NFKBIA-210ENST00000557459 NMRK2Q9NPI5 230 aa20.62■□□□□ 0.89
NFKBIA-210ENST00000557459 ERBB4Q15303 1308 aa20.61■□□□□ 0.89
NFKBIA-210ENST00000557459 CT47B1P0C2W7 299 aaPredicted RBP20.61■□□□□ 0.89
NFKBIA-210ENST00000557459 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
NFKBIA-210ENST00000557459 C10orf71Q711Q0 1435 aa20.61■□□□□ 0.89
NFKBIA-210ENST00000557459 RPS6KA4O75676 772 aa20.6■□□□□ 0.89
NFKBIA-210ENST00000557459 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
NFKBIA-210ENST00000557459 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
NFKBIA-210ENST00000557459 NECTIN2Q92692 538 aa20.6■□□□□ 0.89
NFKBIA-210ENST00000557459 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
NFKBIA-210ENST00000557459 TJP1Q07157 1748 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms