RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
VPS33B-206ENST00000557358 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
VPS33B-206ENST00000557358 CANXP27824 592 aaKnown RBP18.13■□□□□ 0.49
VPS33B-206ENST00000557358 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
VPS33B-206ENST00000557358 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
VPS33B-206ENST00000557358 CD2APQ9Y5K6 639 aa18.13■□□□□ 0.49
VPS33B-206ENST00000557358 MMP10P09238 476 aa18.12■□□□□ 0.49
VPS33B-206ENST00000557358 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
VPS33B-206ENST00000557358 NEUROD2Q15784 382 aa18.12■□□□□ 0.49
VPS33B-206ENST00000557358 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
VPS33B-206ENST00000557358 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
VPS33B-206ENST00000557358 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
VPS33B-206ENST00000557358 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
VPS33B-206ENST00000557358 COL15A1P39059 1388 aa18.1■□□□□ 0.49
VPS33B-206ENST00000557358 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
VPS33B-206ENST00000557358 GYS1P13807 737 aa18.1■□□□□ 0.49
VPS33B-206ENST00000557358 GPR162Q16538 588 aa18.1■□□□□ 0.49
VPS33B-206ENST00000557358 KCNQ3O43525 872 aa18.09■□□□□ 0.49
VPS33B-206ENST00000557358 PELP1Q8IZL8 1130 aaKnown RBP18.09■□□□□ 0.49
VPS33B-206ENST00000557358 BABAM1Q9NWV8 329 aa18.09■□□□□ 0.49
VPS33B-206ENST00000557358 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
VPS33B-206ENST00000557358 IL6STP40189 918 aaPredicted RBP18.08■□□□□ 0.48
VPS33B-206ENST00000557358 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
VPS33B-206ENST00000557358 NARFQ9UHQ1 456 aa18.08■□□□□ 0.48
VPS33B-206ENST00000557358 C4AP0C0L4 1744 aa18.07■□□□□ 0.48
VPS33B-206ENST00000557358 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
VPS33B-206ENST00000557358 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
VPS33B-206ENST00000557358 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
VPS33B-206ENST00000557358 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
VPS33B-206ENST00000557358 SRP68Q9UHB9 627 aaKnown RBP18.07■□□□□ 0.48
VPS33B-206ENST00000557358 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
VPS33B-206ENST00000557358 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
VPS33B-206ENST00000557358 A1BGP04217 495 aa18.05■□□□□ 0.48
VPS33B-206ENST00000557358 FKBP8Q14318 412 aa18.04■□□□□ 0.48
VPS33B-206ENST00000557358 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
VPS33B-206ENST00000557358 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
VPS33B-206ENST00000557358 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
VPS33B-206ENST00000557358 NLGN2Q8NFZ4 835 aa18.03■□□□□ 0.48
VPS33B-206ENST00000557358 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
VPS33B-206ENST00000557358 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
VPS33B-206ENST00000557358 APAF1O14727 1248 aa18.02■□□□□ 0.48
VPS33B-206ENST00000557358 NPHP1O15259 732 aa18.02■□□□□ 0.48
VPS33B-206ENST00000557358 TGFB2P61812 414 aa18.02■□□□□ 0.48
VPS33B-206ENST00000557358 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.47
VPS33B-206ENST00000557358 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
VPS33B-206ENST00000557358 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
VPS33B-206ENST00000557358 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
VPS33B-206ENST00000557358 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
VPS33B-206ENST00000557358 YY1P25490 414 aa17.99■□□□□ 0.47
VPS33B-206ENST00000557358 TM4SF1P30408 202 aa17.99■□□□□ 0.47
VPS33B-206ENST00000557358 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
VPS33B-206ENST00000557358 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
VPS33B-206ENST00000557358 NFIXQ14938 502 aa17.98■□□□□ 0.47
VPS33B-206ENST00000557358 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
VPS33B-206ENST00000557358 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
VPS33B-206ENST00000557358 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
VPS33B-206ENST00000557358 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
VPS33B-206ENST00000557358 GNAI1P63096 354 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 CLEC4GQ6UXB4 293 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 C10orf71Q711Q0 1435 aa17.97■□□□□ 0.47
VPS33B-206ENST00000557358 CHL1O00533 1208 aa17.96■□□□□ 0.47
VPS33B-206ENST00000557358 RGL2O15211 777 aa17.96■□□□□ 0.47
VPS33B-206ENST00000557358 SERPINB2P05120 415 aa17.96■□□□□ 0.47
VPS33B-206ENST00000557358 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
VPS33B-206ENST00000557358 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
VPS33B-206ENST00000557358 DDR1Q08345 913 aa17.96■□□□□ 0.47
VPS33B-206ENST00000557358 CHD4Q14839 1912 aa17.96■□□□□ 0.47
VPS33B-206ENST00000557358 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
VPS33B-206ENST00000557358 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
VPS33B-206ENST00000557358 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
VPS33B-206ENST00000557358 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
VPS33B-206ENST00000557358 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
VPS33B-206ENST00000557358 MYL6BP14649 208 aa17.94■□□□□ 0.46
VPS33B-206ENST00000557358 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
VPS33B-206ENST00000557358 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
VPS33B-206ENST00000557358 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
VPS33B-206ENST00000557358 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 A0A0G2JLW4 131 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 HOXB7P09629 217 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 ST5P78524 1137 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
VPS33B-206ENST00000557358 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
VPS33B-206ENST00000557358 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
VPS33B-206ENST00000557358 ERVV-1B6SEH8 477 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 DPEP1P16444 411 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
VPS33B-206ENST00000557358 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
VPS33B-206ENST00000557358 NBPF5PQ86XG9 351 aaPredicted RBP17.91■□□□□ 0.46
VPS33B-206ENST00000557358 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
VPS33B-206ENST00000557358 PXDNLA1KZ92 1463 aa17.9■□□□□ 0.46
VPS33B-206ENST00000557358 H0YIN7 160 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms