RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 NGEFQ8N5V2 710 aa10.27□□□□□ -0.77
PSEN1-222ENST00000557356 TAF1LQ8IZX4 1826 aa10.27□□□□□ -0.77
PSEN1-222ENST00000557356 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
PSEN1-222ENST00000557356 NARFQ9UHQ1 456 aa10.26□□□□□ -0.77
PSEN1-222ENST00000557356 TSPYL4Q9UJ04 414 aa10.26□□□□□ -0.77
PSEN1-222ENST00000557356 PARP3Q9Y6F1 533 aa10.26□□□□□ -0.77
PSEN1-222ENST00000557356 SOS1Q07889 1333 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-222ENST00000557356 APAF1O14727 1248 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 RGL2O15211 777 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 KCNQ3O43525 872 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 GYS1P13807 737 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 EIF5P55010 431 aaKnown RBP10.25□□□□□ -0.77
PSEN1-222ENST00000557356 EIF4A1P60842 406 aaKnown RBP10.25□□□□□ -0.77
PSEN1-222ENST00000557356 ZBTB1Q9Y2K1 713 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
PSEN1-222ENST00000557356 USP42Q9H9J4 1324 aaKnown RBP10.25□□□□□ -0.77
PSEN1-222ENST00000557356 KCPQ6ZWJ8 1503 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 CHL1O00533 1208 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 GIGYF1O75420 1035 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-222ENST00000557356 MMP10P09238 476 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 AMIGO3Q86WK7 504 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 THUMPD2Q9BTF0 503 aaKnown RBP10.24□□□□□ -0.77
PSEN1-222ENST00000557356 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 RRP7AQ9Y3A4 280 aaKnown RBP10.24□□□□□ -0.77
PSEN1-222ENST00000557356 CICQ96RK0 1608 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-222ENST00000557356 ERBB4Q15303 1308 aa10.24□□□□□ -0.77
PSEN1-222ENST00000557356 A1BGP04217 495 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 TGFB2P61812 414 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 GNAI1P63096 354 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 CLEC4GQ6UXB4 293 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 ZNF652Q9Y2D9 606 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-222ENST00000557356 COL15A1P39059 1388 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
PSEN1-222ENST00000557356 GRIN3BO60391 1043 aa10.22□□□□□ -0.77
PSEN1-222ENST00000557356 HOXB7P09629 217 aa10.22□□□□□ -0.77
PSEN1-222ENST00000557356 USPL1Q5W0Q7 1092 aa10.22□□□□□ -0.77
PSEN1-222ENST00000557356 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
PSEN1-222ENST00000557356 LAS1LQ9Y4W2 734 aaKnown RBP10.22□□□□□ -0.77
PSEN1-222ENST00000557356 TM4SF1P30408 202 aa10.21□□□□□ -0.77
PSEN1-222ENST00000557356 GPR162Q16538 588 aa10.21□□□□□ -0.77
PSEN1-222ENST00000557356 DZIP3Q86Y13 1208 aaKnown RBP10.21□□□□□ -0.77
PSEN1-222ENST00000557356 IFT57Q9NWB7 429 aa10.21□□□□□ -0.77
PSEN1-222ENST00000557356 SRP68Q9UHB9 627 aaKnown RBP10.21□□□□□ -0.77
PSEN1-222ENST00000557356 PDZRN3Q9UPQ7 1066 aa10.21□□□□□ -0.77
PSEN1-222ENST00000557356 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-222ENST00000557356 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.78
PSEN1-222ENST00000557356 FKBP8Q14318 412 aa10.2□□□□□ -0.78
PSEN1-222ENST00000557356 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
PSEN1-222ENST00000557356 VIRMAQ69YN4 1812 aaKnown RBP10.2□□□□□ -0.78
PSEN1-222ENST00000557356 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
PSEN1-222ENST00000557356 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
PSEN1-222ENST00000557356 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
PSEN1-222ENST00000557356 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 TJP1Q07157 1748 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 COL24A1Q17RW2 1714 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 IL16Q14005 1332 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 ERVV-1B6SEH8 477 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 CCER2I3L3R5 266 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 NPHP1O15259 732 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 NFIXQ14938 502 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 WDR63Q8IWG1 891 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 FAM9BQ8IZU0 186 aa10.19□□□□□ -0.78
PSEN1-222ENST00000557356 PRAMEF22A3QJZ6 481 aa10.18□□□□□ -0.78
PSEN1-222ENST00000557356 POLRMTO00411 1230 aaKnown RBP10.18□□□□□ -0.78
PSEN1-222ENST00000557356 CAMTA2O94983 1202 aa10.18□□□□□ -0.78
PSEN1-222ENST00000557356 SERPINB2P05120 415 aa10.18□□□□□ -0.78
PSEN1-222ENST00000557356 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
PSEN1-222ENST00000557356 EIF2S2P20042 333 aaKnown RBP10.18□□□□□ -0.78
PSEN1-222ENST00000557356 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
PSEN1-222ENST00000557356 MYH14Q7Z406 1995 aaKnown RBP10.17□□□□□ -0.78
PSEN1-222ENST00000557356 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 NBPF26B4DH59 902 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 NBPF10Q6P3W6 841 aaKnown RBP10.17□□□□□ -0.78
PSEN1-222ENST00000557356 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 WWC1Q8IX03 1113 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
PSEN1-222ENST00000557356 NBPF15Q8N660 670 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 DDX21Q9NR30 783 aaKnown RBP eCLIP10.17□□□□□ -0.78
PSEN1-222ENST00000557356 MBIPQ9NS73 344 aa10.17□□□□□ -0.78
PSEN1-222ENST00000557356 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
PSEN1-222ENST00000557356 CARMIL3Q8ND23 1372 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 MYL6BP14649 208 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 PDE6BP35913 854 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 DUSP27Q5VZP5 1158 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 HYPKQ9NX55 129 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 PIM2Q9P1W9 311 aa10.16□□□□□ -0.78
PSEN1-222ENST00000557356 MAP3K15Q6ZN16 1313 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
PSEN1-222ENST00000557356 ST5P78524 1137 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 DDR1Q08345 913 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 HSP90AB3PQ58FF7 597 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms