RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SMTNP53814 917 aa9.05□□□□□ -0.96
PRPF39-210ENST00000556718 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
PRPF39-210ENST00000556718 ZNF295-AS1Q8N0V1 137 aa9.05□□□□□ -0.96
PRPF39-210ENST00000556718 SERTAD1Q9UHV2 236 aa9.05□□□□□ -0.96
PRPF39-210ENST00000556718 A0A1W2PNR3 127 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 DCDC2BA2VCK2 349 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
PRPF39-210ENST00000556718 CD33P20138 364 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 SIRT1Q96EB6 747 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
PRPF39-210ENST00000556718 GDPD2Q9HCC8 539 aa9.04□□□□□ -0.96
PRPF39-210ENST00000556718 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 GNB5O14775 395 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 MAPTP10636 758 aaKnown RBP9.03□□□□□ -0.96
PRPF39-210ENST00000556718 TNP2Q05952 138 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 CD163Q86VB7 1156 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 NLRP8Q86W28 1048 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
PRPF39-210ENST00000556718 ABL2P42684 1182 aa9.02□□□□□ -0.97
PRPF39-210ENST00000556718 CHRNA4P43681 627 aa9.02□□□□□ -0.97
PRPF39-210ENST00000556718 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
PRPF39-210ENST00000556718 PRM3Q9NNZ6 103 aa9.02□□□□□ -0.97
PRPF39-210ENST00000556718 IQSEC3Q9UPP2 1182 aaPredicted RBP9.02□□□□□ -0.97
PRPF39-210ENST00000556718 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
PRPF39-210ENST00000556718 ARSJQ5FYB0 599 aaPredicted RBP9.01□□□□□ -0.97
PRPF39-210ENST00000556718 CHSY3Q70JA7 882 aa9.01□□□□□ -0.97
PRPF39-210ENST00000556718 PIK3CDO00329 1044 aa9□□□□□ -0.97
PRPF39-210ENST00000556718 MAP7D1Q3KQU3 841 aa9□□□□□ -0.97
PRPF39-210ENST00000556718 ZIC5Q96T25 663 aa9□□□□□ -0.97
PRPF39-210ENST00000556718 STRN4Q9NRL3 753 aa9□□□□□ -0.97
PRPF39-210ENST00000556718 PARP3Q9Y6F1 533 aa9□□□□□ -0.97
PRPF39-210ENST00000556718 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
PRPF39-210ENST00000556718 A6NJY4 79 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 CDK2AP1O14519 115 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 ADH6P28332 368 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 PCBP4P57723 403 aaKnown RBP8.98□□□□□ -0.97
PRPF39-210ENST00000556718 MTFR1Q15390 333 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 FAM182BQ5T319 152 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 Q8N3U1 123 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 CABP1Q9NZU7 370 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 PCDHGA11Q9Y5H2 935 aa8.98□□□□□ -0.97
PRPF39-210ENST00000556718 ITGB7P26010 798 aa8.97□□□□□ -0.97
PRPF39-210ENST00000556718 NBPF1Q3BBV0 1214 aa8.97□□□□□ -0.97
PRPF39-210ENST00000556718 TRIM11Q96F44 468 aa8.97□□□□□ -0.97
PRPF39-210ENST00000556718 PIK3R2O00459 728 aa8.96□□□□□ -0.98
PRPF39-210ENST00000556718 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
PRPF39-210ENST00000556718 TATP17735 454 aaPredicted RBP8.96□□□□□ -0.98
PRPF39-210ENST00000556718 SEMA3FQ13275 785 aa8.96□□□□□ -0.98
PRPF39-210ENST00000556718 ZDHHC3Q9NYG2 299 aa8.96□□□□□ -0.98
PRPF39-210ENST00000556718 NOP53Q9NZM5 478 aaKnown RBP8.96□□□□□ -0.98
PRPF39-210ENST00000556718 TXLNAP40222 546 aa8.95□□□□□ -0.98
PRPF39-210ENST00000556718 WASHC4Q2M389 1173 aa8.95□□□□□ -0.98
PRPF39-210ENST00000556718 ZDHHC1Q8WTX9 485 aa8.95□□□□□ -0.98
PRPF39-210ENST00000556718 AVENQ9NQS1 362 aaPredicted RBP8.95□□□□□ -0.98
PRPF39-210ENST00000556718 ZNF468Q5VIY5 522 aaPredicted RBP8.94□□□□□ -0.98
PRPF39-210ENST00000556718 EFSO43281 561 aa8.93□□□□□ -0.98
PRPF39-210ENST00000556718 DOC2BQ14184 412 aa8.93□□□□□ -0.98
PRPF39-210ENST00000556718 PLVAPQ9BX97 442 aa8.93□□□□□ -0.98
PRPF39-210ENST00000556718 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
PRPF39-210ENST00000556718 GJA3Q9Y6H8 435 aa8.93□□□□□ -0.98
PRPF39-210ENST00000556718 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
PRPF39-210ENST00000556718 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
PRPF39-210ENST00000556718 MARK1Q9P0L2 795 aa8.92□□□□□ -0.98
PRPF39-210ENST00000556718 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
PRPF39-210ENST00000556718 SKIP12755 728 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 SOX11P35716 441 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 MCM6Q14566 821 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 TBCELQ5QJ74 424 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 ZNF358Q9NW07 568 aa8.9□□□□□ -0.98
PRPF39-210ENST00000556718 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.98
PRPF39-210ENST00000556718 GTF2IP78347 998 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 EML3Q32P44 896 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 LRRC69Q6ZNQ3 347 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 SYT9Q86SS6 491 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 L3MBTL2Q969R5 705 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 MDFIQ99750 246 aa8.89□□□□□ -0.99
PRPF39-210ENST00000556718 ELOA3CA0A087WX78 387 aaPredicted RBP8.88□□□□□ -0.99
PRPF39-210ENST00000556718 ELOA3DA6NLF2 546 aaPredicted RBP8.88□□□□□ -0.99
PRPF39-210ENST00000556718 EPHA4P54764 986 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 ELOA3BQ3SY89 546 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 SH3PXD2AQ5TCZ1 1133 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 ELOA3Q8NG57 546 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
PRPF39-210ENST00000556718 EML1O00423 815 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 BACH1O14867 736 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 NOS2P35228 1153 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 PSME1Q06323 249 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 LAMC2Q13753 1193 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 TEAD4Q15561 434 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 TNS4Q8IZW8 715 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 COG6Q9Y2V7 657 aa8.87□□□□□ -0.99
PRPF39-210ENST00000556718 SPATA31C1P0DKV0 1188 aa8.86□□□□□ -0.99
PRPF39-210ENST00000556718 GATA4P43694 442 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms