RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ITFG2Q969R8 447 aa7.7□□□□□ -1.18
TDP1-215ENST00000556498 UBA5Q9GZZ9 404 aa7.7□□□□□ -1.18
TDP1-215ENST00000556498 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
TDP1-215ENST00000556498 ATP5J2-PTCD1G3V325 749 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 KIF1CO43896 1103 aaKnown RBP7.69□□□□□ -1.18
TDP1-215ENST00000556498 ADH1CP00326 375 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 RAB15P59190 212 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 FOXC1Q12948 553 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 USP4Q13107 963 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 NR5A1Q13285 461 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 AEBP1Q8IUX7 1158 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 MNS1Q8NEH6 495 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 PCDHB11Q9Y5F2 797 aa7.69□□□□□ -1.18
TDP1-215ENST00000556498 CCER2I3L3R5 266 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 BRD1O95696 1058 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 FSHRP23945 695 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 SIRT1Q96EB6 747 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 MYCBPQ99417 103 aaPredicted RBP7.68□□□□□ -1.18
TDP1-215ENST00000556498 ZHX1Q9UKY1 873 aaPredicted RBP7.68□□□□□ -1.18
TDP1-215ENST00000556498 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
TDP1-215ENST00000556498 NACADO15069 1562 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 FAM196BA6NMK8 535 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 GDF9O60383 454 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 RASA1P20936 1047 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 POLD1P28340 1107 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 DHX9Q08211 1270 aaKnown RBP7.67□□□□□ -1.18
TDP1-215ENST00000556498 ELOAQ14241 798 aaKnown RBP7.67□□□□□ -1.18
TDP1-215ENST00000556498 LONRF3Q496Y0 759 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 KRBA2Q6ZNG9 492 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
TDP1-215ENST00000556498 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 CCDC172P0C7W6 258 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 CSB-PGBD3P0DP91 1061 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 CLDN10P78369 228 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 PTK7Q13308 1070 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 CRTC2Q53ET0 693 aaPredicted RBP7.66□□□□□ -1.18
TDP1-215ENST00000556498 LARP1Q6PKG0 1096 aaKnown RBP7.66□□□□□ -1.18
TDP1-215ENST00000556498 APBB1IPQ7Z5R6 666 aaPredicted RBP7.66□□□□□ -1.18
TDP1-215ENST00000556498 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 SNIP1Q8TAD8 396 aaKnown RBP7.66□□□□□ -1.18
TDP1-215ENST00000556498 FRMD4BQ9Y2L6 1034 aa7.66□□□□□ -1.18
TDP1-215ENST00000556498 ZBTB7BO15156 539 aaPredicted RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 NR3C2P08235 984 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 ERVK-9P63128 1117 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 ZNF280DQ6N043 979 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 DDX46Q7L014 1031 aaKnown RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 CCDC116Q8IYX3 515 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 CACTIN-AS1Q8N1I8 211 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 SUDS3Q9H7L9 328 aaPredicted RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 RRAGDQ9NQL2 400 aaPredicted RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 TMPRSS4Q9NRS4 437 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 MAGEC2Q9UBF1 373 aaPredicted RBP7.65□□□□□ -1.18
TDP1-215ENST00000556498 PCDHGA11Q9Y5H2 935 aa7.65□□□□□ -1.18
TDP1-215ENST00000556498 IGF1RP08069 1367 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 CCDC66A2RUB6 948 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L15C9J2P7 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L10C9JJH3 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L13C9JLJ4 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L11C9JVI0 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L21D6R901 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L18D6R9N7 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L22D6RA61 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L17D6RBQ6 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L19D6RCP7 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L20D6RJB6 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 ZSCAN20P17040 1043 aaPredicted RBP7.64□□□□□ -1.19
TDP1-215ENST00000556498 SCTRP47872 440 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 USP17L24Q0WX57 530 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 CDC37Q16543 378 aaPredicted RBP7.64□□□□□ -1.19
TDP1-215ENST00000556498 UVSSAQ2YD98 709 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 PPP1R26Q5T8A7 1209 aaPredicted RBP7.64□□□□□ -1.19
TDP1-215ENST00000556498 LARGE2Q8N3Y3 721 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 NGEFQ8N5V2 710 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
TDP1-215ENST00000556498 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 NOVA2Q9UNW9 492 aaKnown RBP7.64□□□□□ -1.19
TDP1-215ENST00000556498 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 KNSTRNQ9Y448 316 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 PPME1Q9Y570 386 aa7.64□□□□□ -1.19
TDP1-215ENST00000556498 GOLGA6CA6NDK9 693 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 GOLGA6BA6NDN3 693 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 EXOC5O00471 708 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 MARCH6O60337 910 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 MYCP01106 439 aaPredicted RBP7.63□□□□□ -1.19
TDP1-215ENST00000556498 ZNF853P0CG23 659 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 GOLGA6DP0CG33 693 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 GTF2IP78347 998 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 TRIM67Q6ZTA4 783 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 ANKMY2Q8IV38 441 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 CYP4X1Q8N118 509 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 RNF217Q8TC41 542 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 SPATA32Q96LK8 384 aa7.63□□□□□ -1.19
TDP1-215ENST00000556498 NCAPGQ9BPX3 1015 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms