RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RGPD8O14715 1765 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-236ENST00000556220 GNPATO15228 680 aa10.22□□□□□ -0.77
ATXN3-236ENST00000556220 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
ATXN3-236ENST00000556220 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
ATXN3-236ENST00000556220 SSH2Q76I76 1423 aa10.22□□□□□ -0.77
ATXN3-236ENST00000556220 RREB1Q92766 1687 aa10.22□□□□□ -0.77
ATXN3-236ENST00000556220 WASLO00401 505 aaPredicted RBP10.21□□□□□ -0.77
ATXN3-236ENST00000556220 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
ATXN3-236ENST00000556220 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
ATXN3-236ENST00000556220 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
ATXN3-236ENST00000556220 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-236ENST00000556220 CFHP08603 1231 aa10.2□□□□□ -0.78
ATXN3-236ENST00000556220 SLC10A3P09131 477 aa10.2□□□□□ -0.78
ATXN3-236ENST00000556220 EIF3AQ14152 1382 aaKnown RBP10.2□□□□□ -0.78
ATXN3-236ENST00000556220 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
ATXN3-236ENST00000556220 PPARGC1BQ86YN6 1023 aaKnown RBP10.2□□□□□ -0.78
ATXN3-236ENST00000556220 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-236ENST00000556220 CAMTA1Q9Y6Y1 1673 aa10.2□□□□□ -0.78
ATXN3-236ENST00000556220 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
ATXN3-236ENST00000556220 PTF1AQ7RTS3 328 aa10.19□□□□□ -0.78
ATXN3-236ENST00000556220 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
ATXN3-236ENST00000556220 ALS2Q96Q42 1657 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 GPR37O15354 613 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 SLC15A2Q16348 729 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 Q6ZNB5 142 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 MPHOSPH9Q99550 1183 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 STK32BQ9NY57 414 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
ATXN3-236ENST00000556220 GFRA3O60609 400 aa10.17□□□□□ -0.78
ATXN3-236ENST00000556220 FECHP22830 423 aa10.17□□□□□ -0.78
ATXN3-236ENST00000556220 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
ATXN3-236ENST00000556220 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
ATXN3-236ENST00000556220 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
ATXN3-236ENST00000556220 OVOS2A0A0G2JMS6 1433 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 CPDO75976 1380 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 DDB1Q16531 1140 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 GPR162Q16538 588 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 ARXQ96QS3 562 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 DLC1Q96QB1 1528 aa10.16□□□□□ -0.78
ATXN3-236ENST00000556220 NR1I2O75469 434 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 GCP02774 474 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 TXNRD1Q16881 649 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-236ENST00000556220 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
ATXN3-236ENST00000556220 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-236ENST00000556220 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
ATXN3-236ENST00000556220 ATP7BP35670 1465 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 BCL9O00512 1426 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
ATXN3-236ENST00000556220 USP19O94966 1318 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 ACEP12821 1306 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 CHD4Q14839 1912 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-236ENST00000556220 NLRP13Q86W25 1043 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 CRB1P82279 1406 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 POLR3AO14802 1390 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-236ENST00000556220 MYOM1P52179 1685 aa10.12□□□□□ -0.79
ATXN3-236ENST00000556220 TLL1O43897 1013 aa10.11□□□□□ -0.79
ATXN3-236ENST00000556220 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
ATXN3-236ENST00000556220 SCUBE3Q8IX30 993 aa10.11□□□□□ -0.79
ATXN3-236ENST00000556220 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-236ENST00000556220 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
ATXN3-236ENST00000556220 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-236ENST00000556220 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
ATXN3-236ENST00000556220 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
ATXN3-236ENST00000556220 TULP1O00294 542 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-236ENST00000556220 ADH1BP00325 375 aa10.09□□□□□ -0.79
ATXN3-236ENST00000556220 PEAK1Q9H792 1746 aa10.09□□□□□ -0.79
ATXN3-236ENST00000556220 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
ATXN3-236ENST00000556220 RGPD3A6NKT7 1758 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-236ENST00000556220 RGPD4Q7Z3J3 1758 aa10.09□□□□□ -0.79
ATXN3-236ENST00000556220 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
ATXN3-236ENST00000556220 EXOC5O00471 708 aa10.08□□□□□ -0.8
ATXN3-236ENST00000556220 SLC19A1P41440 591 aa10.08□□□□□ -0.8
ATXN3-236ENST00000556220 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
ATXN3-236ENST00000556220 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
ATXN3-236ENST00000556220 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
ATXN3-236ENST00000556220 LMO7Q8WWI1 1683 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 S1PR4O95977 384 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 HSPA6P17066 643 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
ATXN3-236ENST00000556220 WDR17Q8IZU2 1322 aa10.07□□□□□ -0.8
ATXN3-236ENST00000556220 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
ATXN3-236ENST00000556220 POLD1P28340 1107 aa10.06□□□□□ -0.8
ATXN3-236ENST00000556220 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
ATXN3-236ENST00000556220 SLC6A16Q9GZN6 736 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms