RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MCM2P49736 904 aa17.88■□□□□ 0.45
NEK9-209ENST00000556170 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
NEK9-209ENST00000556170 USP44Q9H0E7 712 aa17.88■□□□□ 0.45
NEK9-209ENST00000556170 MYOM1P52179 1685 aa17.87■□□□□ 0.45
NEK9-209ENST00000556170 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
NEK9-209ENST00000556170 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
NEK9-209ENST00000556170 SYCE3A1L190 88 aa17.86■□□□□ 0.45
NEK9-209ENST00000556170 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
NEK9-209ENST00000556170 RAB11FIP3O75154 756 aa17.86■□□□□ 0.45
NEK9-209ENST00000556170 RAB3GAP1Q15042 981 aa17.86■□□□□ 0.45
NEK9-209ENST00000556170 TCEANC2Q96MN5 208 aa17.86■□□□□ 0.45
NEK9-209ENST00000556170 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 PKP1Q13835 747 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 ZRSR1Q15695 479 aaKnown RBP17.85■□□□□ 0.45
NEK9-209ENST00000556170 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 DRC7Q8IY82 874 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 CPA1P15085 419 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 CHMLP26374 656 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 COPS6Q7L5N1 327 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 ERC1Q8IUD2 1116 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 KLHDC4Q8TBB5 520 aa17.85■□□□□ 0.45
NEK9-209ENST00000556170 H3BQV1 296 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 IFFO2Q5TF58 517 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 CDK12Q9NYV4 1490 aaPredicted RBP17.84■□□□□ 0.45
NEK9-209ENST00000556170 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 FAM184AQ8NB25 1140 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 KIAA0232Q92628 1395 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 CPS1P31327 1500 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 FAM43AQ8N2R8 423 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 PLEKHG1Q9ULL1 1385 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
NEK9-209ENST00000556170 CD163L1Q9NR16 1453 aa17.84■□□□□ 0.45
NEK9-209ENST00000556170 XAGE3Q8WTP9 111 aa17.83■□□□□ 0.45
NEK9-209ENST00000556170 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
NEK9-209ENST00000556170 IGSF1Q8N6C5 1336 aa17.83■□□□□ 0.44
NEK9-209ENST00000556170 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.44
NEK9-209ENST00000556170 PPLO60437 1756 aa17.83■□□□□ 0.44
NEK9-209ENST00000556170 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
NEK9-209ENST00000556170 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
NEK9-209ENST00000556170 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
NEK9-209ENST00000556170 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
NEK9-209ENST00000556170 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
NEK9-209ENST00000556170 PDRG1Q9NUG6 133 aa17.82■□□□□ 0.44
NEK9-209ENST00000556170 A0A087WZG4 1122 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 PPFIA3O75145 1194 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 EIF4A1P60842 406 aaKnown RBP17.81■□□□□ 0.44
NEK9-209ENST00000556170 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
NEK9-209ENST00000556170 HSPA2P54652 639 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
NEK9-209ENST00000556170 KDM4AO75164 1064 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 PHF14O94880 888 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 WASHC4Q2M389 1173 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 PALD1Q9ULE6 856 aa17.81■□□□□ 0.44
NEK9-209ENST00000556170 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
NEK9-209ENST00000556170 NPHP1O15259 732 aa17.8■□□□□ 0.44
NEK9-209ENST00000556170 CEBPZQ03701 1054 aaKnown RBP17.8■□□□□ 0.44
NEK9-209ENST00000556170 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
NEK9-209ENST00000556170 TOMM22Q9NS69 142 aa17.8■□□□□ 0.44
NEK9-209ENST00000556170 ESPNB1AK53 854 aa17.8■□□□□ 0.44
NEK9-209ENST00000556170 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
NEK9-209ENST00000556170 GRM8O00222 908 aa17.79■□□□□ 0.44
NEK9-209ENST00000556170 PROSER3Q2NL68 480 aa17.79■□□□□ 0.44
NEK9-209ENST00000556170 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
NEK9-209ENST00000556170 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
NEK9-209ENST00000556170 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
NEK9-209ENST00000556170 MBD3O95983 291 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 APPP05067 770 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 MED14O60244 1454 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
NEK9-209ENST00000556170 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
NEK9-209ENST00000556170 FKBP4Q02790 459 aaKnown RBP eCLIP17.77■□□□□ 0.44
NEK9-209ENST00000556170 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
NEK9-209ENST00000556170 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
NEK9-209ENST00000556170 BICD2Q8TD16 824 aa17.77■□□□□ 0.44
NEK9-209ENST00000556170 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
NEK9-209ENST00000556170 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.43
NEK9-209ENST00000556170 GNL2Q13823 731 aaKnown RBP17.76■□□□□ 0.43
NEK9-209ENST00000556170 CSPP1Q1MSJ5 1256 aa17.76■□□□□ 0.43
NEK9-209ENST00000556170 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
NEK9-209ENST00000556170 NDUFB9Q9Y6M9 179 aa17.76■□□□□ 0.43
NEK9-209ENST00000556170 PSMA5P28066 241 aa17.76■□□□□ 0.43
NEK9-209ENST00000556170 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
NEK9-209ENST00000556170 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
NEK9-209ENST00000556170 LIMCH1Q9UPQ0 1083 aa17.75■□□□□ 0.43
NEK9-209ENST00000556170 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
NEK9-209ENST00000556170 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
NEK9-209ENST00000556170 TMEM131LA2VDJ0 1609 aa17.74■□□□□ 0.43
NEK9-209ENST00000556170 FMNL2Q96PY5 1086 aa17.74■□□□□ 0.43
NEK9-209ENST00000556170 PREX1Q8TCU6 1659 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms