RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 PLPP7Q8NBV4 271 aa3.68□□□□□ -1.82
NEK9-208ENST00000555961 KLRG1Q96E93 195 aa3.68□□□□□ -1.82
NEK9-208ENST00000555961 DCAF5Q96JK2 942 aa3.68□□□□□ -1.82
NEK9-208ENST00000555961 ARID1BQ8NFD5 2236 aaPredicted RBP3.67□□□□□ -1.82
NEK9-208ENST00000555961 BACH1O14867 736 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 INHAP05111 366 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 PSME1Q06323 249 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 IRF5Q13568 498 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 EML3Q32P44 896 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 NLRP8Q86W28 1048 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 PHTF2Q8N3S3 785 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 EDARADDQ8WWZ3 215 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 ABHD17AQ96GS6 310 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 CRISPLD1Q9H336 500 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 HRH3Q9Y5N1 445 aa3.67□□□□□ -1.82
NEK9-208ENST00000555961 ATXN7O15265 892 aaPredicted RBP3.66□□□□□ -1.82
NEK9-208ENST00000555961 RAD21O60216 631 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 SMTNP53814 917 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 PLA2G4EQ3MJ16 856 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 BICDL1Q6ZP65 573 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 SLCO4C1Q6ZQN7 724 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 NEUROD4Q9HD90 331 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 NOP53Q9NZM5 478 aaKnown RBP3.66□□□□□ -1.82
NEK9-208ENST00000555961 CABP1Q9NZU7 370 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 SERTAD1Q9UHV2 236 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 NOD1Q9Y239 953 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 PCDHGC4Q9Y5F7 938 aa3.66□□□□□ -1.82
NEK9-208ENST00000555961 BNIP3LO60238 219 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 LZTS3O60299 673 aaPredicted RBP3.65□□□□□ -1.83
NEK9-208ENST00000555961 ARAFP10398 606 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 SKIP12755 728 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 FLIIQ13045 1269 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 GRIN2CQ14957 1233 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 TSGA10IPQ3SY00 556 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 SPOCK3Q9BQ16 436 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 ZCCHC2Q9C0B9 1178 aaKnown RBP3.65□□□□□ -1.83
NEK9-208ENST00000555961 ZDHHC3Q9NYG2 299 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 GGA1Q9UJY5 639 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 CHIC2Q9UKJ5 165 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 PRR12Q9ULL5 1215 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 CHMP3Q9Y3E7 222 aa3.65□□□□□ -1.83
NEK9-208ENST00000555961 A0A1W2PNR3 127 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 DCDC2BA2VCK2 349 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 A6NJY4 79 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 NEURL1BA8MQ27 555 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 SHISA8B8ZZ34 492 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 CDK2AP1O14519 115 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 GNB5O14775 395 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 KHNYNO15037 678 aaKnown RBP3.64□□□□□ -1.83
NEK9-208ENST00000555961 STAU1O95793 577 aaKnown RBP3.64□□□□□ -1.83
NEK9-208ENST00000555961 THBS1P07996 1170 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 ADH6P28332 368 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 SCNN1DP51172 638 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 CTBSQ01459 385 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 MCM6Q14566 821 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 TRIM50Q86XT4 487 aa3.64□□□□□ -1.83
NEK9-208ENST00000555961 RBM19Q9Y4C8 960 aaKnown RBP3.64□□□□□ -1.83
NEK9-208ENST00000555961 EPXP11678 715 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 ATP4AP20648 1035 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 SNRPNP63162 240 aaKnown RBP3.63□□□□□ -1.83
NEK9-208ENST00000555961 GTF2IP78347 998 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 UBAP2LQ14157 1087 aaKnown RBP3.63□□□□□ -1.83
NEK9-208ENST00000555961 NFATC2IPQ8NCF5 419 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 AVENQ9NQS1 362 aaPredicted RBP3.63□□□□□ -1.83
NEK9-208ENST00000555961 NDFIP2Q9NV92 336 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 ZNF232Q9UNY5 417 aa3.63□□□□□ -1.83
NEK9-208ENST00000555961 SPDYE3A6NKU9 549 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 TMEM229AB2RXF0 380 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 FAM157BP0CG42 384 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 MAPTP10636 758 aaKnown RBP3.62□□□□□ -1.83
NEK9-208ENST00000555961 UBTFP17480 764 aaKnown RBP3.62□□□□□ -1.83
NEK9-208ENST00000555961 CD33P20138 364 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 ALAS2P22557 587 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 ATP1A2P50993 1020 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 FZD5Q13467 585 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 NEUROD1Q13562 356 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 MTFR1Q15390 333 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 FAM182BQ5T319 152 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 BTBD6Q96KE9 485 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 SLC4A9Q96Q91 983 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 MARK1Q9P0L2 795 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 COG6Q9Y2V7 657 aa3.62□□□□□ -1.83
NEK9-208ENST00000555961 USP17L5A8MUK1 530 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 PIK3CDO00329 1044 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 C2CD2LO14523 706 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 TNP2Q05952 138 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 NCOA4Q13772 614 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 SAMD5Q5TGI4 173 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 C1orf229Q6ZS94 237 aaPredicted RBP3.61□□□□□ -1.83
NEK9-208ENST00000555961 CHSY3Q70JA7 882 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 RHPN1Q8TCX5 695 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 ZIC5Q96T25 663 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 DNAAF2Q9NVR5 837 aaKnown RBP3.61□□□□□ -1.83
NEK9-208ENST00000555961 ZNF358Q9NW07 568 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 SCHIP1Q9P0W5 487 aaPredicted RBP3.61□□□□□ -1.83
NEK9-208ENST00000555961 PCDHGA11Q9Y5H2 935 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 GPC6Q9Y625 555 aaPredicted RBP3.61□□□□□ -1.83
NEK9-208ENST00000555961 PARP3Q9Y6F1 533 aa3.61□□□□□ -1.83
NEK9-208ENST00000555961 SERTM1A2A2V5 107 aa3.6□□□□□ -1.83
NEK9-208ENST00000555961 KRBA1A5PL33 1030 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms