RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-222ENST00000555907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
RAD51B-222ENST00000555907 ERVV-2B6SEH9 535 aa14.72□□□□□ -0.05
RAD51B-222ENST00000555907 CHL1O00533 1208 aa14.72□□□□□ -0.05
RAD51B-222ENST00000555907 KIF3CO14782 793 aa14.72□□□□□ -0.05
RAD51B-222ENST00000555907 GNAI1P63096 354 aa14.72□□□□□ -0.05
RAD51B-222ENST00000555907 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
RAD51B-222ENST00000555907 N4BP2Q86UW6 1770 aaPredicted RBP14.72□□□□□ -0.05
RAD51B-222ENST00000555907 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.05
RAD51B-222ENST00000555907 LOC102724428A0A0B4J2F2 783 aa14.71□□□□□ -0.05
RAD51B-222ENST00000555907 SIK1P57059 783 aa14.71□□□□□ -0.05
RAD51B-222ENST00000555907 TAF7Q15545 349 aaPredicted RBP14.71□□□□□ -0.05
RAD51B-222ENST00000555907 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
RAD51B-222ENST00000555907 MYH16Q9H6N6 1097 aa14.71□□□□□ -0.05
RAD51B-222ENST00000555907 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
RAD51B-222ENST00000555907 ATG3Q9NT62 314 aa14.71□□□□□ -0.05
RAD51B-222ENST00000555907 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
RAD51B-222ENST00000555907 KDM6AO15550 1401 aaPredicted RBP14.7□□□□□ -0.06
RAD51B-222ENST00000555907 DUSP27Q5VZP5 1158 aa14.7□□□□□ -0.06
RAD51B-222ENST00000555907 THUMPD2Q9BTF0 503 aaKnown RBP14.7□□□□□ -0.06
RAD51B-222ENST00000555907 GNPATO15228 680 aa14.69□□□□□ -0.06
RAD51B-222ENST00000555907 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
RAD51B-222ENST00000555907 CABP4P57796 275 aa14.69□□□□□ -0.06
RAD51B-222ENST00000555907 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
RAD51B-222ENST00000555907 CENPBP07199 599 aaPredicted RBP14.68□□□□□ -0.06
RAD51B-222ENST00000555907 TEFQ10587 303 aa14.68□□□□□ -0.06
RAD51B-222ENST00000555907 ITPK1Q13572 414 aa14.68□□□□□ -0.06
RAD51B-222ENST00000555907 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
RAD51B-222ENST00000555907 BCS1LQ9Y276 419 aa14.68□□□□□ -0.06
RAD51B-222ENST00000555907 CAPN15O75808 1086 aa14.67□□□□□ -0.06
RAD51B-222ENST00000555907 ZNF831Q5JPB2 1677 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 MRC1P22897 1456 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 A0A0G2JLW4 131 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 MMP10P09238 476 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 APLP1P51693 650 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 HTRA3P83110 453 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 ARHGAP27Q6ZUM4 889 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
RAD51B-222ENST00000555907 NMRK2Q9NPI5 230 aa14.66□□□□□ -0.06
RAD51B-222ENST00000555907 CT47B1P0C2W7 299 aaPredicted RBP14.65□□□□□ -0.06
RAD51B-222ENST00000555907 SSFA2P28290 1259 aa14.65□□□□□ -0.06
RAD51B-222ENST00000555907 MBIPQ9NS73 344 aa14.65□□□□□ -0.06
RAD51B-222ENST00000555907 CICQ96RK0 1608 aaPredicted RBP14.65□□□□□ -0.06
RAD51B-222ENST00000555907 FANCIQ9NVI1 1328 aa14.65□□□□□ -0.06
RAD51B-222ENST00000555907 PXDNLA1KZ92 1463 aa14.64□□□□□ -0.07
RAD51B-222ENST00000555907 COL5A3P25940 1745 aaPredicted RBP14.64□□□□□ -0.07
RAD51B-222ENST00000555907 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
RAD51B-222ENST00000555907 KIAA1551Q9HCM1 1747 aa14.63□□□□□ -0.07
RAD51B-222ENST00000555907 BTBD11A6QL63 1104 aa14.63□□□□□ -0.07
RAD51B-222ENST00000555907 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
RAD51B-222ENST00000555907 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
RAD51B-222ENST00000555907 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
RAD51B-222ENST00000555907 MYH14Q7Z406 1995 aaKnown RBP14.63□□□□□ -0.07
RAD51B-222ENST00000555907 WDR90Q96KV7 1748 aa14.63□□□□□ -0.07
RAD51B-222ENST00000555907 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
RAD51B-222ENST00000555907 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
RAD51B-222ENST00000555907 PTCD1O75127 700 aaKnown RBP14.62□□□□□ -0.07
RAD51B-222ENST00000555907 TOMM70O94826 608 aa14.62□□□□□ -0.07
RAD51B-222ENST00000555907 TSR2Q969E8 191 aaKnown RBP14.62□□□□□ -0.07
RAD51B-222ENST00000555907 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
RAD51B-222ENST00000555907 DPEP1P16444 411 aa14.61□□□□□ -0.07
RAD51B-222ENST00000555907 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
RAD51B-222ENST00000555907 C16orf71Q8IYS4 520 aaPredicted RBP14.61□□□□□ -0.07
RAD51B-222ENST00000555907 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
RAD51B-222ENST00000555907 KIF13BQ9NQT8 1826 aa14.61□□□□□ -0.07
RAD51B-222ENST00000555907 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
RAD51B-222ENST00000555907 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
RAD51B-222ENST00000555907 RC3H1Q5TC82 1133 aaKnown RBP14.6□□□□□ -0.07
RAD51B-222ENST00000555907 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
RAD51B-222ENST00000555907 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
RAD51B-222ENST00000555907 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
RAD51B-222ENST00000555907 TJP1Q07157 1748 aa14.59□□□□□ -0.07
RAD51B-222ENST00000555907 TRAPPC3LQ5T215 181 aa14.59□□□□□ -0.07
RAD51B-222ENST00000555907 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
RAD51B-222ENST00000555907 CHMP4AQ9BY43 222 aa14.59□□□□□ -0.07
RAD51B-222ENST00000555907 VAMP4O75379 141 aa14.58□□□□□ -0.08
RAD51B-222ENST00000555907 HOXB7P09629 217 aa14.58□□□□□ -0.08
RAD51B-222ENST00000555907 COL13A1Q5TAT6 717 aaPredicted RBP14.58□□□□□ -0.08
RAD51B-222ENST00000555907 C9orf131Q5VYM1 1079 aa14.58□□□□□ -0.08
RAD51B-222ENST00000555907 CNTNAP4Q9C0A0 1308 aa14.58□□□□□ -0.08
RAD51B-222ENST00000555907 C4AP0C0L4 1744 aa14.58□□□□□ -0.08
RAD51B-222ENST00000555907 KDM3BQ7LBC6 1761 aa14.57□□□□□ -0.08
RAD51B-222ENST00000555907 KCNQ3O43525 872 aa14.57□□□□□ -0.08
RAD51B-222ENST00000555907 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
RAD51B-222ENST00000555907 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
RAD51B-222ENST00000555907 PARP3Q9Y6F1 533 aa14.57□□□□□ -0.08
RAD51B-222ENST00000555907 BRCA1P38398 1863 aaKnown RBP14.57□□□□□ -0.08
RAD51B-222ENST00000555907 KCPQ6ZWJ8 1503 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 RPS6KA4O75676 772 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 TGFB2P61812 414 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 TWISTNBQ3B726 338 aaPredicted RBP14.56□□□□□ -0.08
RAD51B-222ENST00000555907 TTC5Q8N0Z6 440 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 ARHGEF1Q92888 912 aaKnown RBP14.56□□□□□ -0.08
RAD51B-222ENST00000555907 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 C10orf71Q711Q0 1435 aa14.56□□□□□ -0.08
RAD51B-222ENST00000555907 RFC4P35249 363 aa14.55□□□□□ -0.08
RAD51B-222ENST00000555907 CRKLP46109 303 aaKnown RBP14.55□□□□□ -0.08
RAD51B-222ENST00000555907 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
RAD51B-222ENST00000555907 ALDH1L2Q3SY69 923 aa14.55□□□□□ -0.08
RAD51B-222ENST00000555907 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms