RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
GPHN-208ENST00000555503 TOM1L2Q6ZVM7 507 aa9.94□□□□□ -0.82
GPHN-208ENST00000555503 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
GPHN-208ENST00000555503 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
GPHN-208ENST00000555503 AATKQ6ZMQ8 1374 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 TUSC1Q2TAM9 212 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 SIN3AQ96ST3 1273 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 LIMD1Q9UGP4 676 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
GPHN-208ENST00000555503 THRAP3Q9Y2W1 955 aaKnown RBP9.93□□□□□ -0.82
GPHN-208ENST00000555503 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
GPHN-208ENST00000555503 ROCK2O75116 1388 aaKnown RBP9.92□□□□□ -0.82
GPHN-208ENST00000555503 EVC2Q86UK5 1308 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 NEUROD1Q13562 356 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 DDB1Q16531 1140 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 AEBP1Q8IUX7 1158 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 UTRNP46939 3433 aa9.92□□□□□ -0.82
GPHN-208ENST00000555503 BRD4O60885 1362 aaPredicted RBP9.91□□□□□ -0.82
GPHN-208ENST00000555503 QSER1Q2KHR3 1735 aa9.91□□□□□ -0.82
GPHN-208ENST00000555503 WDR17Q8IZU2 1322 aa9.91□□□□□ -0.82
GPHN-208ENST00000555503 SEC24BO95487 1268 aa9.91□□□□□ -0.82
GPHN-208ENST00000555503 PPP1R1BQ9UD71 204 aaPredicted RBP9.91□□□□□ -0.82
GPHN-208ENST00000555503 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
GPHN-208ENST00000555503 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
GPHN-208ENST00000555503 CSB-PGBD3P0DP91 1061 aa9.9□□□□□ -0.82
GPHN-208ENST00000555503 C6orf132Q5T0Z8 1188 aa9.9□□□□□ -0.82
GPHN-208ENST00000555503 MARCH10Q8NA82 808 aaPredicted RBP9.9□□□□□ -0.82
GPHN-208ENST00000555503 PDGFDQ9GZP0 370 aaPredicted RBP9.9□□□□□ -0.82
GPHN-208ENST00000555503 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.82
GPHN-208ENST00000555503 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
GPHN-208ENST00000555503 ABCC6O95255 1503 aa9.9□□□□□ -0.82
GPHN-208ENST00000555503 PAPPAQ13219 1627 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 TTC21BQ7Z4L5 1316 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 WWC1Q8IX03 1113 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 SPON1Q9HCB6 807 aa9.89□□□□□ -0.83
GPHN-208ENST00000555503 LY75O60449 1722 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 CD163L1Q9NR16 1453 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 KCNQ2O43526 872 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 FOSBP53539 338 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 IRF5Q13568 498 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
GPHN-208ENST00000555503 TNS2Q63HR2 1409 aa9.88□□□□□ -0.83
GPHN-208ENST00000555503 GOLGB1Q14789 3259 aaKnown RBP9.88□□□□□ -0.83
GPHN-208ENST00000555503 SPTLC1O15269 473 aa9.87□□□□□ -0.83
GPHN-208ENST00000555503 ZBTB7AO95365 584 aa9.87□□□□□ -0.83
GPHN-208ENST00000555503 YY1P25490 414 aa9.87□□□□□ -0.83
GPHN-208ENST00000555503 ARHGEF25Q86VW2 580 aa9.87□□□□□ -0.83
GPHN-208ENST00000555503 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
GPHN-208ENST00000555503 ITGB4P16144 1822 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 TTC21AQ8NDW8 1320 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
GPHN-208ENST00000555503 EVX2Q03828 476 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 KCNH5Q8NCM2 988 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
GPHN-208ENST00000555503 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
GPHN-208ENST00000555503 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 POTEFA5A3E0 1075 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
GPHN-208ENST00000555503 PLSCR1O15162 318 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 CD46P15529 392 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
GPHN-208ENST00000555503 NME9Q86XW9 330 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
GPHN-208ENST00000555503 RGS22Q8NE09 1264 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 CARD10Q9BWT7 1032 aa9.85□□□□□ -0.83
GPHN-208ENST00000555503 EXOC5O00471 708 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 PRSS12P56730 875 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 PDE4CQ08493 712 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 TMCO4Q5TGY1 634 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 TMC1Q8TDI8 760 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 GLMNQ92990 594 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 PRM3Q9NNZ6 103 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 CCDC7Q96M83 1385 aa9.84□□□□□ -0.83
GPHN-208ENST00000555503 C5P01031 1676 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 POM121CA8CG34 1229 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 HAX1O00165 279 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 GJA5P36382 358 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 ABL2P42684 1182 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 TXNRD1Q16881 649 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
GPHN-208ENST00000555503 NLRP2Q9NX02 1062 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 STK32BQ9NY57 414 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 MAP2P11137 1827 aaKnown RBP9.83□□□□□ -0.84
GPHN-208ENST00000555503 SBNO2Q9Y2G9 1366 aa9.83□□□□□ -0.84
GPHN-208ENST00000555503 BCL9O00512 1426 aa9.82□□□□□ -0.84
GPHN-208ENST00000555503 SLC39A7Q92504 469 aa9.82□□□□□ -0.84
GPHN-208ENST00000555503 TBC1D2BQ9UPU7 963 aa9.82□□□□□ -0.84
GPHN-208ENST00000555503 A0A1W2PP64 1363 aa9.82□□□□□ -0.84
GPHN-208ENST00000555503 ERBB3P21860 1342 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms