RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 PSMD2Q13200 908 aa5.97□□□□□ -1.45
LINC01197-202ENST00000555332 PRPF38AQ8NAV1 312 aaKnown RBP5.97□□□□□ -1.45
LINC01197-202ENST00000555332 PCDHGA10Q9Y5H3 936 aa5.97□□□□□ -1.45
LINC01197-202ENST00000555332 PRXQ9BXM0 1461 aa5.97□□□□□ -1.45
LINC01197-202ENST00000555332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.97□□□□□ -1.45
LINC01197-202ENST00000555332 RCCD1A6NED2 376 aa5.97□□□□□ -1.45
LINC01197-202ENST00000555332 UBE4AQ14139 1066 aa5.97□□□□□ -1.45
LINC01197-202ENST00000555332 ARHGEF40Q8TER5 1519 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 TREHO43280 583 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 DAB2P98082 770 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 WDR78Q5VTH9 848 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 SLF2Q8IX21 1173 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.45
LINC01197-202ENST00000555332 FBXO9Q9UK97 447 aaPredicted RBP5.96□□□□□ -1.45
LINC01197-202ENST00000555332 EFCAB5A4FU69 1503 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 PRPF40AO75400 957 aaKnown RBP5.96□□□□□ -1.46
LINC01197-202ENST00000555332 PHF14O94880 888 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 PPP4CP60510 307 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 FERMT3Q86UX7 667 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 SFMBT1Q9UHJ3 866 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 DDX41Q9UJV9 622 aaKnown RBP5.96□□□□□ -1.46
LINC01197-202ENST00000555332 EID1Q9Y6B2 187 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 EPRSP07814 1512 aaKnown RBP5.96□□□□□ -1.46
LINC01197-202ENST00000555332 PLB1Q6P1J6 1458 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 NR1H3Q13133 447 aa5.96□□□□□ -1.46
LINC01197-202ENST00000555332 BSDC1Q9NW68 430 aaPredicted RBP5.96□□□□□ -1.46
LINC01197-202ENST00000555332 KDM5CP41229 1560 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 PER1O15534 1290 aaPredicted RBP5.95□□□□□ -1.46
LINC01197-202ENST00000555332 CYB5RLQ6IPT4 315 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 KIAA1024Q9UPX6 916 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 PPP1R12AO14974 1030 aaPredicted RBP5.95□□□□□ -1.46
LINC01197-202ENST00000555332 DHX8Q14562 1220 aaKnown RBP5.95□□□□□ -1.46
LINC01197-202ENST00000555332 SLAIN1Q8ND83 568 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 SCYL1Q96KG9 808 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 C8orf48Q96LL4 319 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 PCF11O94913 1555 aaKnown RBP5.95□□□□□ -1.46
LINC01197-202ENST00000555332 LDHAP00338 332 aaKnown RBP5.95□□□□□ -1.46
LINC01197-202ENST00000555332 USP5P45974 858 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 MTMR2Q13614 643 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 SULF1Q8IWU6 871 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 TMC1Q8TDI8 760 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 EPAS1Q99814 870 aa5.95□□□□□ -1.46
LINC01197-202ENST00000555332 SERINC3Q13530 473 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 PLEKHG4Q58EX7 1191 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 GAS2L2Q8NHY3 880 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 SRPK1Q96SB4 655 aaKnown RBP5.94□□□□□ -1.46
LINC01197-202ENST00000555332 KDM5AP29375 1690 aaKnown RBP5.94□□□□□ -1.46
LINC01197-202ENST00000555332 SAFB2Q14151 953 aaKnown RBP eCLIP5.94□□□□□ -1.46
LINC01197-202ENST00000555332 SYCP2LQ5T4T6 812 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 AMOTL1Q8IY63 956 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 RBCK1Q9BYM8 510 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 MAP3K20Q9NYL2 800 aaKnown RBP5.94□□□□□ -1.46
LINC01197-202ENST00000555332 RAPGEF6Q8TEU7 1601 aa5.94□□□□□ -1.46
LINC01197-202ENST00000555332 ZNF500O60304 480 aaPredicted RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 GNALP38405 381 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 NEUROD1Q13562 356 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 RNF135Q8IUD6 432 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 TTC13Q8NBP0 860 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 ZNF512BQ96KM6 892 aaPredicted RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 CHST12Q9NRB3 414 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 USP48Q86UV5 1035 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 FANCLQ9NW38 375 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 PHLDB1Q86UU1 1377 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 ITSN2Q9NZM3 1697 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 PITPNM1O00562 1244 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 SF3B2Q13435 895 aaKnown RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 NAA30Q147X3 362 aaPredicted RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 TRIM52Q96A61 297 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 QTRT2Q9H974 415 aaKnown RBP5.93□□□□□ -1.46
LINC01197-202ENST00000555332 CYLDQ9NQC7 956 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 PRKAB1Q9Y478 270 aa5.93□□□□□ -1.46
LINC01197-202ENST00000555332 EXOC5O00471 708 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 DKK1O94907 266 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 EHHADHQ08426 723 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 CKAP2LQ8IYA6 745 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 ZNF654Q8IZM8 581 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 PGBD3Q8N328 593 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 SENP7Q9BQF6 1050 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 ATF4P18848 351 aaPredicted RBP5.92□□□□□ -1.46
LINC01197-202ENST00000555332 VPS37DQ86XT2 251 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 PLPP7Q8NBV4 271 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 DNAAF2Q9NVR5 837 aaKnown RBP5.92□□□□□ -1.46
LINC01197-202ENST00000555332 PREX1Q8TCU6 1659 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 FRMD6Q96NE9 622 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 C12orf49Q9H741 205 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 SRA1Q9HD15 236 aaKnown RBP5.92□□□□□ -1.46
LINC01197-202ENST00000555332 NRBP1Q9UHY1 535 aa5.92□□□□□ -1.46
LINC01197-202ENST00000555332 CCDC85CA6NKD9 419 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 CDC45O75419 566 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 DSC3Q14574 896 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 RDH13Q8NBN7 331 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 SLC39A13Q96H72 371 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 NEUROD4Q9HD90 331 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 IQSEC2Q5JU85 1478 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 TEX14Q8IWB6 1497 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 CHMP4BP1P59074 171 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 MYBPC2Q14324 1141 aa5.91□□□□□ -1.46
LINC01197-202ENST00000555332 TTC39BQ5VTQ0 682 aaPredicted RBP5.91□□□□□ -1.46
LINC01197-202ENST00000555332 SYMPKQ92797 1274 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms