RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 RRAGCQ9HB90 399 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 DYRK1BQ9Y463 629 aa5.66□□□□□ -1.5
KTN1-220ENST00000555172 A0A1W2PRU2 124 aa5.65□□□□□ -1.51
KTN1-220ENST00000555172 FBXO45P0C2W1 286 aa5.65□□□□□ -1.51
KTN1-220ENST00000555172 GRIN2CQ14957 1233 aa5.65□□□□□ -1.51
KTN1-220ENST00000555172 GMCL1Q96IK5 515 aa5.65□□□□□ -1.51
KTN1-220ENST00000555172 ESPNB1AK53 854 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 ATP5J2-PTCD1G3V325 749 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 ATP9BO43861 1147 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 SRPK2P78362 688 aaKnown RBP5.64□□□□□ -1.51
KTN1-220ENST00000555172 MAFBQ9Y5Q3 323 aaPredicted RBP5.64□□□□□ -1.51
KTN1-220ENST00000555172 H7C1W4 665 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 TBC1D9Q6ZT07 1266 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 SPATA32Q96LK8 384 aa5.64□□□□□ -1.51
KTN1-220ENST00000555172 C1QTNF9BB2RNN3 333 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 ATG7O95352 703 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 CDCA8Q53HL2 280 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 SLC27A3Q5K4L6 730 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 CERS3Q8IU89 383 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 KLRG1Q96E93 195 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 NUCKS1Q9H1E3 243 aaKnown RBP5.63□□□□□ -1.51
KTN1-220ENST00000555172 VRTNQ9H8Y1 702 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 MKL2Q9ULH7 1088 aa5.63□□□□□ -1.51
KTN1-220ENST00000555172 GIGYF1O75420 1035 aaPredicted RBP5.62□□□□□ -1.51
KTN1-220ENST00000555172 HOXB4P17483 251 aaPredicted RBP5.62□□□□□ -1.51
KTN1-220ENST00000555172 MCCD1P59942 119 aaPredicted RBP5.62□□□□□ -1.51
KTN1-220ENST00000555172 NBPF10Q6P3W6 841 aaKnown RBP5.62□□□□□ -1.51
KTN1-220ENST00000555172 NBPF15Q8N660 670 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 NFATC2IPQ8NCF5 419 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 GPAMQ9HCL2 828 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 GPSM3Q9Y4H4 160 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 LINC00114Q6XXX2 140 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 LRRC4BQ9NT99 713 aa5.62□□□□□ -1.51
KTN1-220ENST00000555172 TMEM88BA6NKF7 163 aa5.61□□□□□ -1.51
KTN1-220ENST00000555172 CHRNA4P43681 627 aa5.61□□□□□ -1.51
KTN1-220ENST00000555172 NOM1Q5C9Z4 860 aaKnown RBP5.61□□□□□ -1.51
KTN1-220ENST00000555172 CD163Q86VB7 1156 aa5.61□□□□□ -1.51
KTN1-220ENST00000555172 EDARADDQ8WWZ3 215 aa5.61□□□□□ -1.51
KTN1-220ENST00000555172 GRIP2Q9C0E4 1043 aa5.61□□□□□ -1.51
KTN1-220ENST00000555172 NSFL1CQ9UNZ2 370 aaKnown RBP5.61□□□□□ -1.51
KTN1-220ENST00000555172 SKIP12755 728 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 TCF3P15923 654 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 DOC2BQ14184 412 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 SLFNL1Q499Z3 407 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 SEMA6BQ9H3T3 888 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 GOLGA2P5Q9HBQ8 144 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 TIMMDC1Q9NPL8 285 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 PPP1R1BQ9UD71 204 aaPredicted RBP5.6□□□□□ -1.51
KTN1-220ENST00000555172 BRPF3Q9ULD4 1205 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 ARID4BQ4LE39 1312 aaPredicted RBP5.6□□□□□ -1.51
KTN1-220ENST00000555172 F11P03951 625 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 ZNF16P17020 682 aaPredicted RBP5.6□□□□□ -1.51
KTN1-220ENST00000555172 GPC1P35052 558 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 PHKA2P46019 1235 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 SCTRP47872 440 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 SREK1Q8WXA9 508 aaKnown RBP5.6□□□□□ -1.51
KTN1-220ENST00000555172 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 NLRP3Q96P20 1036 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 CADPSQ9ULU8 1353 aa5.6□□□□□ -1.51
KTN1-220ENST00000555172 C2CD2LO14523 706 aa5.59□□□□□ -1.51
KTN1-220ENST00000555172 MAP2K3P46734 347 aa5.59□□□□□ -1.51
KTN1-220ENST00000555172 B4GALNT3Q6L9W6 998 aa5.59□□□□□ -1.51
KTN1-220ENST00000555172 DNAJC14Q6Y2X3 702 aaPredicted RBP5.59□□□□□ -1.51
KTN1-220ENST00000555172 PCDHB9Q9Y5E1 797 aa5.59□□□□□ -1.51
KTN1-220ENST00000555172 USP17L3A6NCW0 530 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 USP17L4A6NCW7 530 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 PIK3CDO00329 1044 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 AMPD1P23109 780 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 ELOAQ14241 798 aaKnown RBP5.58□□□□□ -1.52
KTN1-220ENST00000555172 USP17L2Q6R6M4 530 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 USP17L1Q7RTZ2 530 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 RAB6BQ9NRW1 208 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 CEP126Q9P2H0 1117 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 USP17L5A8MUK1 530 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 ZMYM1Q5SVZ6 1142 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 KANK4Q5T7N3 995 aaPredicted RBP5.58□□□□□ -1.52
KTN1-220ENST00000555172 RNF135Q8IUD6 432 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 PLEKHM2Q8IWE5 1019 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 SIRT1Q96EB6 747 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 ARHGEF10LQ9HCE6 1279 aa5.58□□□□□ -1.52
KTN1-220ENST00000555172 WASLO00401 505 aaPredicted RBP5.57□□□□□ -1.52
KTN1-220ENST00000555172 LZTS3O60299 673 aaPredicted RBP5.57□□□□□ -1.52
KTN1-220ENST00000555172 UBAP2LQ14157 1087 aaKnown RBP5.57□□□□□ -1.52
KTN1-220ENST00000555172 LARP1Q6PKG0 1096 aaKnown RBP5.56□□□□□ -1.52
KTN1-220ENST00000555172 TAS1R3Q7RTX0 852 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 SEPT12Q8IYM1 358 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 CFHR5Q9BXR6 569 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 GGA1Q9UJY5 639 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 SPATA31C2B4DYI2 1134 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 ERVK-9P63128 1117 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 CTBSQ01459 385 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 CLN3Q13286 438 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 FOXD4L6Q3SYB3 417 aaPredicted RBP5.56□□□□□ -1.52
KTN1-220ENST00000555172 CC2D2BQ6DHV5 1058 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 FOXD4L3Q6VB84 417 aaPredicted RBP5.56□□□□□ -1.52
KTN1-220ENST00000555172 DEPDC4Q8N2C3 294 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 GIPC2Q8TF65 315 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 BCL2L13Q9BXK5 485 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 RUBCNLQ9H714 662 aa5.56□□□□□ -1.52
KTN1-220ENST00000555172 MKRN1Q9UHC7 482 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms