RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
STRN3-205ENST00000554991 BTBD11A6QL63 1104 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 MMP10P09238 476 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 MCM10Q7L590 875 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
STRN3-205ENST00000554991 FMNL2Q96PY5 1086 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
STRN3-205ENST00000554991 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
STRN3-205ENST00000554991 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
STRN3-205ENST00000554991 SBF1O95248 1867 aa11.3□□□□□ -0.6
STRN3-205ENST00000554991 STARD3NLO95772 234 aa11.3□□□□□ -0.6
STRN3-205ENST00000554991 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
STRN3-205ENST00000554991 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
STRN3-205ENST00000554991 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
STRN3-205ENST00000554991 ZPR1O75312 459 aa11.29□□□□□ -0.6
STRN3-205ENST00000554991 CYP19A1P11511 503 aaPredicted RBP11.29□□□□□ -0.6
STRN3-205ENST00000554991 GYS1P13807 737 aa11.29□□□□□ -0.6
STRN3-205ENST00000554991 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
STRN3-205ENST00000554991 NLGN1Q8N2Q7 840 aa11.29□□□□□ -0.6
STRN3-205ENST00000554991 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
STRN3-205ENST00000554991 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
STRN3-205ENST00000554991 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
STRN3-205ENST00000554991 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
STRN3-205ENST00000554991 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
STRN3-205ENST00000554991 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
STRN3-205ENST00000554991 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
STRN3-205ENST00000554991 NFE2L2Q16236 605 aa11.28□□□□□ -0.6
STRN3-205ENST00000554991 INTS5Q6P9B9 1019 aaKnown RBP11.28□□□□□ -0.6
STRN3-205ENST00000554991 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
STRN3-205ENST00000554991 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.6
STRN3-205ENST00000554991 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
STRN3-205ENST00000554991 A0A087WZG4 1122 aa11.26□□□□□ -0.61
STRN3-205ENST00000554991 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
STRN3-205ENST00000554991 LAMB2P55268 1798 aa11.26□□□□□ -0.61
STRN3-205ENST00000554991 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
STRN3-205ENST00000554991 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
STRN3-205ENST00000554991 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
STRN3-205ENST00000554991 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
STRN3-205ENST00000554991 FKBP8Q14318 412 aa11.25□□□□□ -0.61
STRN3-205ENST00000554991 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
STRN3-205ENST00000554991 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
STRN3-205ENST00000554991 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
STRN3-205ENST00000554991 NARFQ9UHQ1 456 aa11.25□□□□□ -0.61
STRN3-205ENST00000554991 FER1L6Q2WGJ9 1857 aa11.24□□□□□ -0.61
STRN3-205ENST00000554991 KCNQ3O43525 872 aa11.24□□□□□ -0.61
STRN3-205ENST00000554991 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
STRN3-205ENST00000554991 YBX3P16989 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
STRN3-205ENST00000554991 UTRNP46939 3433 aa11.23□□□□□ -0.61
STRN3-205ENST00000554991 CACNA1FO60840 1977 aa11.23□□□□□ -0.61
STRN3-205ENST00000554991 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
STRN3-205ENST00000554991 DDR1Q08345 913 aa11.23□□□□□ -0.61
STRN3-205ENST00000554991 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
STRN3-205ENST00000554991 CCDC146Q8IYE0 955 aa11.23□□□□□ -0.61
STRN3-205ENST00000554991 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
STRN3-205ENST00000554991 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
STRN3-205ENST00000554991 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
STRN3-205ENST00000554991 A1BGP04217 495 aa11.22□□□□□ -0.61
STRN3-205ENST00000554991 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
STRN3-205ENST00000554991 RIPK4P57078 832 aa11.22□□□□□ -0.61
STRN3-205ENST00000554991 NPHP1O15259 732 aa11.21□□□□□ -0.61
STRN3-205ENST00000554991 PIP4K2AP48426 406 aaPredicted RBP11.21□□□□□ -0.61
STRN3-205ENST00000554991 TGFB2P61812 414 aa11.21□□□□□ -0.61
STRN3-205ENST00000554991 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
STRN3-205ENST00000554991 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
STRN3-205ENST00000554991 TSPYL4Q9UJ04 414 aa11.21□□□□□ -0.61
STRN3-205ENST00000554991 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
STRN3-205ENST00000554991 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
STRN3-205ENST00000554991 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
STRN3-205ENST00000554991 NFIXQ14938 502 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 RUNDC1Q96C34 613 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 RRP7AQ9Y3A4 280 aaKnown RBP11.2□□□□□ -0.62
STRN3-205ENST00000554991 SLX4Q8IY92 1834 aa11.2□□□□□ -0.62
STRN3-205ENST00000554991 MYH3P11055 1940 aa11.19□□□□□ -0.62
STRN3-205ENST00000554991 ATP10DQ9P241 1426 aa11.19□□□□□ -0.62
STRN3-205ENST00000554991 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
STRN3-205ENST00000554991 DPEP1P16444 411 aa11.19□□□□□ -0.62
STRN3-205ENST00000554991 USP16Q9Y5T5 823 aa11.19□□□□□ -0.62
STRN3-205ENST00000554991 DDX60Q8IY21 1712 aaKnown RBP11.18□□□□□ -0.62
STRN3-205ENST00000554991 SERPINB2P05120 415 aa11.18□□□□□ -0.62
STRN3-205ENST00000554991 KCNA4P22459 653 aa11.18□□□□□ -0.62
STRN3-205ENST00000554991 TM4SF1P30408 202 aa11.18□□□□□ -0.62
STRN3-205ENST00000554991 TBC1D9BQ66K14 1250 aa11.18□□□□□ -0.62
STRN3-205ENST00000554991 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
STRN3-205ENST00000554991 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
STRN3-205ENST00000554991 ADCY9O60503 1353 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 SPEF2Q9C093 1822 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 ANP32CO43423 234 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
STRN3-205ENST00000554991 ST5P78524 1137 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
STRN3-205ENST00000554991 CNBD1Q8NA66 436 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms