RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
CCDC85C-202ENST00000554877 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
CCDC85C-202ENST00000554877 CHD4Q14839 1912 aa16.37■□□□□ 0.21
CCDC85C-202ENST00000554877 A1BGP04217 495 aa16.36■□□□□ 0.21
CCDC85C-202ENST00000554877 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
CCDC85C-202ENST00000554877 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
CCDC85C-202ENST00000554877 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
CCDC85C-202ENST00000554877 CHRNA5P30532 468 aa16.35■□□□□ 0.21
CCDC85C-202ENST00000554877 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
CCDC85C-202ENST00000554877 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
CCDC85C-202ENST00000554877 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
CCDC85C-202ENST00000554877 COL15A1P39059 1388 aa16.35■□□□□ 0.21
CCDC85C-202ENST00000554877 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 TM4SF1P30408 202 aa16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 NFIXQ14938 502 aa16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 MRC1P22897 1456 aa16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
CCDC85C-202ENST00000554877 TJP1Q07157 1748 aa16.33■□□□□ 0.21
CCDC85C-202ENST00000554877 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CCDC85C-202ENST00000554877 PRAMEF22A3QJZ6 481 aa16.33■□□□□ 0.2
CCDC85C-202ENST00000554877 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
CCDC85C-202ENST00000554877 USP16Q9Y5T5 823 aa16.33■□□□□ 0.2
CCDC85C-202ENST00000554877 ZNF831Q5JPB2 1677 aa16.33■□□□□ 0.2
CCDC85C-202ENST00000554877 PXDNLA1KZ92 1463 aa16.32■□□□□ 0.2
CCDC85C-202ENST00000554877 SERPINB2P05120 415 aa16.32■□□□□ 0.2
CCDC85C-202ENST00000554877 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
CCDC85C-202ENST00000554877 BCL2L12Q9HB09 334 aa16.32■□□□□ 0.2
CCDC85C-202ENST00000554877 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
CCDC85C-202ENST00000554877 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
CCDC85C-202ENST00000554877 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
CCDC85C-202ENST00000554877 NPHP1O15259 732 aa16.31■□□□□ 0.2
CCDC85C-202ENST00000554877 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
CCDC85C-202ENST00000554877 GPBP1L1Q9HC44 474 aaPredicted RBP16.31■□□□□ 0.2
CCDC85C-202ENST00000554877 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 KCNA3P22001 575 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 RALBP1Q15311 655 aa16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
CCDC85C-202ENST00000554877 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 C4AP0C0L4 1744 aa16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 SNRPA1P09661 255 aaKnown RBP16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
CCDC85C-202ENST00000554877 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
CCDC85C-202ENST00000554877 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
CCDC85C-202ENST00000554877 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
CCDC85C-202ENST00000554877 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 IL6STP40189 918 aaPredicted RBP16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 NFE2L2Q16236 605 aa16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
CCDC85C-202ENST00000554877 UTRNP46939 3433 aa16.27■□□□□ 0.19
CCDC85C-202ENST00000554877 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
CCDC85C-202ENST00000554877 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
CCDC85C-202ENST00000554877 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC85C-202ENST00000554877 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
CCDC85C-202ENST00000554877 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
CCDC85C-202ENST00000554877 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
CCDC85C-202ENST00000554877 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
CCDC85C-202ENST00000554877 UBR2Q8IWV8 1755 aa16.25■□□□□ 0.19
CCDC85C-202ENST00000554877 H0YIN7 160 aa16.24■□□□□ 0.19
CCDC85C-202ENST00000554877 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
CCDC85C-202ENST00000554877 RIPK4P57078 832 aa16.24■□□□□ 0.19
CCDC85C-202ENST00000554877 C9orf131Q5VYM1 1079 aa16.24■□□□□ 0.19
CCDC85C-202ENST00000554877 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
CCDC85C-202ENST00000554877 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
CCDC85C-202ENST00000554877 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
CCDC85C-202ENST00000554877 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC85C-202ENST00000554877 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
CCDC85C-202ENST00000554877 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 MYL6BP14649 208 aa16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 PRR5LQ6MZQ0 368 aa16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 NBPF15Q8N660 670 aa16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 TTLL6Q8N841 843 aa16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
CCDC85C-202ENST00000554877 RASSF7Q02833 373 aa16.2■□□□□ 0.18
CCDC85C-202ENST00000554877 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
CCDC85C-202ENST00000554877 CNBD1Q8NA66 436 aa16.2■□□□□ 0.18
CCDC85C-202ENST00000554877 TSPYL4Q9UJ04 414 aa16.2■□□□□ 0.18
CCDC85C-202ENST00000554877 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
CCDC85C-202ENST00000554877 KIF13BQ9NQT8 1826 aa16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 EIF2S2P20042 333 aaKnown RBP16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 PDE6BP35913 854 aa16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 ST5P78524 1137 aa16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCDC85C-202ENST00000554877 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
CCDC85C-202ENST00000554877 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
CCDC85C-202ENST00000554877 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
CCDC85C-202ENST00000554877 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
CCDC85C-202ENST00000554877 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms