RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CCDC112Q8NEF3 446 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 ZNF396Q96N95 335 aaPredicted RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 RBSNQ9H1K0 784 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 BOLA2Q9H3K6 86 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 CCDC9Q9Y3X0 531 aaKnown RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 TBX22Q9Y458 520 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 AATKQ6ZMQ8 1374 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 HOMER1Q86YM7 354 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 PDCL2Q8N4E4 241 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 SIL1Q9H173 461 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 HYPKQ9NX55 129 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 CEP126Q9P2H0 1117 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 KAT6BQ8WYB5 2073 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 NCKAP5LQ9HCH0 1330 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 ARAP3Q8WWN8 1544 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 MYO5CQ9NQX4 1742 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 SGSM2O43147 1006 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 ADCY5O95622 1261 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 CDK11BP21127 795 aaKnown RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 CLEC17AQ6ZS10 378 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 FILIP1Q7Z7B0 1213 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 CEP57L1Q8IYX8 460 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 JMYQ8N9B5 988 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 TMEM63CQ9P1W3 806 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 TTC41PQ6P2S7 1318 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 POLR1AO95602 1720 aaPredicted RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 FOXO3O43524 673 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 CD2BP2O95400 341 aaKnown RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 ME1P48163 572 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 TRIM29Q14134 588 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 STK38Q15208 465 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 USP48Q86UV5 1035 aa4.61□□□□□ -1.67
KTN1-217ENST00000554831 TFIP11Q9UBB9 837 aaKnown RBP4.61□□□□□ -1.67
KTN1-217ENST00000554831 TATP17735 454 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 FAM200AQ8TCP9 573 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 USP44Q9H0E7 712 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 TOMM22Q9NS69 142 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 HMG20BQ9P0W2 317 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 CTNNA3Q9UI47 895 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 PNPLA6Q8IY17 1366 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 UNC13BO14795 1591 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 ANXA1P04083 346 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 NOLC1Q14978 699 aaKnown RBP eCLIP4.6□□□□□ -1.67
KTN1-217ENST00000554831 WASHC4Q2M389 1173 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 ANKLE2Q86XL3 938 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 SSH3Q8TE77 659 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 CCDC8Q9H0W5 538 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 HOOK1Q9UJC3 728 aaKnown RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 CTAGE5O15320 804 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 APPP05067 770 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 HMGB1P09429 215 aaKnown RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 CUL4AQ13619 759 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 SAFBQ15424 915 aaKnown RBP eCLIP4.6□□□□□ -1.67
KTN1-217ENST00000554831 FMNL2Q96PY5 1086 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 U3KPZ7 1027 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 AOX1Q06278 1338 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 POGZQ7Z3K3 1410 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 KIF2AO00139 706 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 F13A1P00488 732 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 STK3Q13188 491 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 TPD52L1Q16890 204 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 KSR2Q6VAB6 950 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 DDX54Q8TDD1 881 aaKnown RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 TM6SF1Q9BZW5 370 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 TTC12Q9H892 705 aaPredicted RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 PNMA6EA0A0J9YXQ4 647 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 GIMAP6Q6P9H5 292 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 MPRIPQ6WCQ1 1025 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 RAD50Q92878 1312 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 DNAJC2Q99543 621 aaKnown RBP4.6□□□□□ -1.67
KTN1-217ENST00000554831 STAP2Q9UGK3 403 aa4.6□□□□□ -1.67
KTN1-217ENST00000554831 LAMC1P11047 1609 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 UGGT1Q9NYU2 1555 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 GRM8O00222 908 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 GJB2P29033 226 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 HSPA4P34932 840 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 LARP6Q9BRS8 491 aaKnown RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 RBM8AQ9Y5S9 174 aaKnown RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 TNRQ92752 1358 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 ZNF500O60304 480 aaPredicted RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 NEMFO60524 1076 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 AK2P54819 239 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 AKAP17AQ02040 695 aaKnown RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 CEBPZQ03701 1054 aaKnown RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 PKP1Q13835 747 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 NEO1Q92859 1461 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 ARHGAP31Q2M1Z3 1444 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 DDX11Q96FC9 970 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 ZSCAN16Q9H4T2 348 aaPredicted RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 ANO10Q9NW15 660 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 ARGLU1Q9NWB6 273 aaPredicted RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 DNM1Q05193 864 aaKnown RBP4.59□□□□□ -1.67
KTN1-217ENST00000554831 VPS53Q5VIR6 699 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 CKAP2LQ8IYA6 745 aa4.59□□□□□ -1.67
KTN1-217ENST00000554831 TPM1P09493 284 aa4.59□□□□□ -1.68
KTN1-217ENST00000554831 MNS1Q8NEH6 495 aa4.59□□□□□ -1.68
KTN1-217ENST00000554831 PKNOX2Q96KN3 472 aa4.59□□□□□ -1.68
KTN1-217ENST00000554831 DACT1Q9NYF0 836 aa4.59□□□□□ -1.68
KTN1-217ENST00000554831 MSH6P52701 1360 aa4.58□□□□□ -1.68
KTN1-217ENST00000554831 PROSER2Q86WR7 435 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms