RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 RNF20Q5VTR2 975 aa19.49■□□□□ 0.71
PPP4R3A-205ENST00000554684 LDHAL6AQ6ZMR3 332 aa19.49■□□□□ 0.71
PPP4R3A-205ENST00000554684 NIP7Q9Y221 180 aaKnown RBP eCLIP19.48■□□□□ 0.71
PPP4R3A-205ENST00000554684 INSRP06213 1382 aa19.48■□□□□ 0.71
PPP4R3A-205ENST00000554684 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
PPP4R3A-205ENST00000554684 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
PPP4R3A-205ENST00000554684 ZNF521Q96K83 1311 aa19.48■□□□□ 0.71
PPP4R3A-205ENST00000554684 LRRFIP1Q32MZ4 808 aaKnown RBP19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 RABEP1Q15276 862 aa19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 INO80Q9ULG1 1556 aaPredicted RBP19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 GNPATO15228 680 aa19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 DNTTIP2Q5QJE6 756 aaKnown RBP19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 KIF1BPQ96EK5 621 aa19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 PLEKHF1Q96S99 279 aa19.47■□□□□ 0.71
PPP4R3A-205ENST00000554684 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 NBPF5PQ86XG9 351 aaPredicted RBP19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 ANKIB1Q9P2G1 1089 aa19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 TRDNQ13061 729 aa19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 FAM184AQ8NB25 1140 aa19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
PPP4R3A-205ENST00000554684 VPS37CA5D8V6 355 aaPredicted RBP19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 DHX16O60231 1041 aaKnown RBP19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 NUCB1Q02818 461 aa19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 CHL1O00533 1208 aa19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 HELBQ8NG08 1087 aaPredicted RBP19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 FAM89AQ96GI7 184 aa19.45■□□□□ 0.7
PPP4R3A-205ENST00000554684 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 MCTP1Q6DN14 999 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 SLC52A2Q9HAB3 445 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 H3BQV1 296 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 IFFO2Q5TF58 517 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 QTRT2Q9H974 415 aaKnown RBP19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 PTPRMP28827 1452 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 HTATSF1O43719 755 aaKnown RBP19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 RBM5P52756 815 aaKnown RBP eCLIP19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 TRIM34Q9BYJ4 488 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 SMC3Q9UQE7 1217 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 MADDQ8WXG6 1647 aa19.44■□□□□ 0.7
PPP4R3A-205ENST00000554684 FAM135BQ49AJ0 1406 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 TBC1D9Q6ZT07 1266 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ANKRD44Q8N8A2 993 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ERBB3P21860 1342 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 TRMT2AQ8IZ69 625 aaKnown RBP19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 KLHDC4Q8TBB5 520 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 SYAP1Q96A49 352 aaPredicted RBP19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ASAP1Q9ULH1 1129 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ZBTB7BO15156 539 aaPredicted RBP19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 NUCB2P80303 420 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 NFXL1Q6ZNB6 911 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 ZNF622Q969S3 477 aaKnown RBP eCLIP19.43■□□□□ 0.72e-7■■■□□ 14.6
PPP4R3A-205ENST00000554684 LRP2BPQ9P2M1 347 aa19.43■□□□□ 0.7
PPP4R3A-205ENST00000554684 PHKG2P15735 406 aa19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 BMP2KLQ5H9B9 411 aa19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 UPF3BQ9BZI7 483 aaKnown RBP19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 RAI14Q9P0K7 980 aa19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 SEC24BO95487 1268 aa19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 C6orf229H3BNL8 230 aa19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
PPP4R3A-205ENST00000554684 GRM8O00222 908 aa19.41■□□□□ 0.7
PPP4R3A-205ENST00000554684 SPATA31A3Q5VYP0 1347 aa19.41■□□□□ 0.7
PPP4R3A-205ENST00000554684 K7ELQ4 463 aaPredicted RBP19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 TBC1D2Q9BYX2 928 aa19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 SMC5Q8IY18 1101 aa19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 SETDB2Q96T68 719 aa19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 RTCBQ9Y3I0 505 aaKnown RBP19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 CPLX1O14810 134 aa19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 HCLS1P14317 486 aaPredicted RBP19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
PPP4R3A-205ENST00000554684 VPS53Q5VIR6 699 aa19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 DDX21Q9NR30 783 aaKnown RBP eCLIP19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 ANKRD18BA2A2Z9 1011 aa19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 AMOTL1Q8IY63 956 aa19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 RPGRQ92834 1020 aaKnown RBP19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 SMARCC1Q92922 1105 aaPredicted RBP19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 ADGRB3O60242 1522 aa19.39■□□□□ 0.69
PPP4R3A-205ENST00000554684 USP19O94966 1318 aa19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 SLC4A8Q2Y0W8 1093 aa19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 CAMSAP1Q5T5Y3 1602 aa19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 GNL3LQ9NVN8 582 aaKnown RBP19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
PPP4R3A-205ENST00000554684 EIF4A1P60842 406 aaKnown RBP19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 ATP2B2Q01814 1243 aa19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 RAB11FIP3O75154 756 aa19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 SYNE3Q6ZMZ3 975 aa19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
PPP4R3A-205ENST00000554684 IFIT1P09914 478 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms