RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 USP47Q96K76 1375 aa13.83□□□□□ -0.2
PSMC1-204ENST00000554624 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
PSMC1-204ENST00000554624 GPR162Q16538 588 aa13.82□□□□□ -0.2
PSMC1-204ENST00000554624 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
PSMC1-204ENST00000554624 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
PSMC1-204ENST00000554624 INSRP06213 1382 aa13.82□□□□□ -0.2
PSMC1-204ENST00000554624 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
PSMC1-204ENST00000554624 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
PSMC1-204ENST00000554624 LTN1O94822 1766 aa13.81□□□□□ -0.2
PSMC1-204ENST00000554624 TULP1O00294 542 aaPredicted RBP13.8□□□□□ -0.2
PSMC1-204ENST00000554624 SEMA3EO15041 775 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 EVI5O60447 810 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 KCNQ4P56696 695 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 ZNF784Q8NCA9 323 aaPredicted RBP13.8□□□□□ -0.2
PSMC1-204ENST00000554624 FLAD1Q8NFF5 587 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
PSMC1-204ENST00000554624 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
PSMC1-204ENST00000554624 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
PSMC1-204ENST00000554624 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
PSMC1-204ENST00000554624 FLT4P35916 1363 aa13.79□□□□□ -0.2
PSMC1-204ENST00000554624 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
PSMC1-204ENST00000554624 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
PSMC1-204ENST00000554624 UTRNP46939 3433 aa13.78□□□□□ -0.2
PSMC1-204ENST00000554624 NSD2O96028 1365 aa13.77□□□□□ -0.21
PSMC1-204ENST00000554624 GPR153Q6NV75 609 aa13.77□□□□□ -0.21
PSMC1-204ENST00000554624 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
PSMC1-204ENST00000554624 COL23A1Q86Y22 540 aaPredicted RBP13.77□□□□□ -0.21
PSMC1-204ENST00000554624 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
PSMC1-204ENST00000554624 MEGF6O75095 1541 aa13.76□□□□□ -0.21
PSMC1-204ENST00000554624 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
PSMC1-204ENST00000554624 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
PSMC1-204ENST00000554624 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
PSMC1-204ENST00000554624 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
PSMC1-204ENST00000554624 BTAF1O14981 1849 aa13.76□□□□□ -0.21
PSMC1-204ENST00000554624 PAPPAQ13219 1627 aa13.75□□□□□ -0.21
PSMC1-204ENST00000554624 CYP27B1O15528 508 aa13.75□□□□□ -0.21
PSMC1-204ENST00000554624 MYOM1P52179 1685 aa13.75□□□□□ -0.21
PSMC1-204ENST00000554624 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
PSMC1-204ENST00000554624 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
PSMC1-204ENST00000554624 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
PSMC1-204ENST00000554624 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
PSMC1-204ENST00000554624 PIGBQ92521 554 aa13.72□□□□□ -0.21
PSMC1-204ENST00000554624 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
PSMC1-204ENST00000554624 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
PSMC1-204ENST00000554624 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
PSMC1-204ENST00000554624 AK7Q96M32 723 aa13.71□□□□□ -0.21
PSMC1-204ENST00000554624 EYA1Q99502 592 aa13.71□□□□□ -0.21
PSMC1-204ENST00000554624 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
PSMC1-204ENST00000554624 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
PSMC1-204ENST00000554624 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
PSMC1-204ENST00000554624 C1QTNF8P60827 252 aa13.69□□□□□ -0.22
PSMC1-204ENST00000554624 PCGF6Q9BYE7 350 aa13.69□□□□□ -0.22
PSMC1-204ENST00000554624 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
PSMC1-204ENST00000554624 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 NUDT7P0C024 238 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 SSFA2P28290 1259 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
PSMC1-204ENST00000554624 SIK1P57059 783 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
PSMC1-204ENST00000554624 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
PSMC1-204ENST00000554624 GOLGB1Q14789 3259 aaKnown RBP13.67□□□□□ -0.22
PSMC1-204ENST00000554624 HSP90AB1P08238 724 aaKnown RBP13.67□□□□□ -0.22
PSMC1-204ENST00000554624 PHKG2P15735 406 aa13.67□□□□□ -0.22
PSMC1-204ENST00000554624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
PSMC1-204ENST00000554624 NCAPD2Q15021 1401 aa13.66□□□□□ -0.22
PSMC1-204ENST00000554624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
PSMC1-204ENST00000554624 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
PSMC1-204ENST00000554624 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
PSMC1-204ENST00000554624 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
PSMC1-204ENST00000554624 LY75O60449 1722 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 QSER1Q2KHR3 1735 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 PHF14O94880 888 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
PSMC1-204ENST00000554624 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
PSMC1-204ENST00000554624 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
PSMC1-204ENST00000554624 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
PSMC1-204ENST00000554624 EPAS1Q99814 870 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 PANK3Q9H999 370 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
PSMC1-204ENST00000554624 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
PSMC1-204ENST00000554624 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
PSMC1-204ENST00000554624 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
PSMC1-204ENST00000554624 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
PSMC1-204ENST00000554624 DOT1LQ8TEK3 1739 aa13.64□□□□□ -0.23
PSMC1-204ENST00000554624 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
PSMC1-204ENST00000554624 GRXCR2A6NFK2 248 aa13.63□□□□□ -0.23
PSMC1-204ENST00000554624 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
PSMC1-204ENST00000554624 LINC00116Q8NCU8 138 aa13.63□□□□□ -0.23
PSMC1-204ENST00000554624 DDX12PQ92771 950 aa13.63□□□□□ -0.23
PSMC1-204ENST00000554624 SENP3-EIF4A1A0A087X0R7 540 aa13.62□□□□□ -0.23
PSMC1-204ENST00000554624 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
PSMC1-204ENST00000554624 NLGN1Q8N2Q7 840 aa13.62□□□□□ -0.23
PSMC1-204ENST00000554624 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
PSMC1-204ENST00000554624 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
PSMC1-204ENST00000554624 GNPATO15228 680 aa13.61□□□□□ -0.23
PSMC1-204ENST00000554624 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
PSMC1-204ENST00000554624 ITPK1Q13572 414 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms