RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ZNF295-AS1Q8N0V1 137 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
ATXN3-227ENST00000554491 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 GGA1Q9UJY5 639 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 GDF2Q9UK05 429 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-227ENST00000554491 USP3Q9Y6I4 520 aa7.55□□□□□ -1.2
ATXN3-227ENST00000554491 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
ATXN3-227ENST00000554491 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-227ENST00000554491 COL8A1P27658 744 aa7.54□□□□□ -1.2
ATXN3-227ENST00000554491 SEMA3FQ13275 785 aa7.54□□□□□ -1.2
ATXN3-227ENST00000554491 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
ATXN3-227ENST00000554491 GOLGA6L1Q8N7Z2 621 aa7.54□□□□□ -1.2
ATXN3-227ENST00000554491 NIFKQ9BYG3 293 aaKnown RBP7.54□□□□□ -1.2
ATXN3-227ENST00000554491 NESP48681 1621 aa7.53□□□□□ -1.2
ATXN3-227ENST00000554491 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
ATXN3-227ENST00000554491 MKL2Q9ULH7 1088 aa7.53□□□□□ -1.2
ATXN3-227ENST00000554491 IQSEC3Q9UPP2 1182 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-227ENST00000554491 PCDHGC4Q9Y5F7 938 aa7.53□□□□□ -1.2
ATXN3-227ENST00000554491 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
ATXN3-227ENST00000554491 BAZ1AQ9NRL2 1556 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-227ENST00000554491 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
ATXN3-227ENST00000554491 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
ATXN3-227ENST00000554491 SLCO4C1Q6ZQN7 724 aa7.52□□□□□ -1.21
ATXN3-227ENST00000554491 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
ATXN3-227ENST00000554491 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
ATXN3-227ENST00000554491 A0A1W2PNR3 127 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 DCDC2BA2VCK2 349 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 EPXP11678 715 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 AMPD1P23109 780 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 FIGNL1Q6PIW4 674 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 C1orf216Q8TAB5 229 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 SUV39H2Q9H5I1 410 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 COG6Q9Y2V7 657 aa7.51□□□□□ -1.21
ATXN3-227ENST00000554491 A6NJY4 79 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-227ENST00000554491 CD33P20138 364 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 SOX11P35716 441 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 MTFR1Q15390 333 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 ARSJQ5FYB0 599 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-227ENST00000554491 NLRP8Q86W28 1048 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 BTBD6Q96KE9 485 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 KLF15Q9UIH9 416 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 PARP3Q9Y6F1 533 aa7.5□□□□□ -1.21
ATXN3-227ENST00000554491 CDK2AP1O14519 115 aa7.49□□□□□ -1.21
ATXN3-227ENST00000554491 ADAM23O75077 832 aa7.49□□□□□ -1.21
ATXN3-227ENST00000554491 ARAFP10398 606 aa7.49□□□□□ -1.21
ATXN3-227ENST00000554491 MAPTP10636 758 aaKnown RBP7.49□□□□□ -1.21
ATXN3-227ENST00000554491 TNP2Q05952 138 aa7.49□□□□□ -1.21
ATXN3-227ENST00000554491 NCAPD3P42695 1498 aa7.49□□□□□ -1.21
ATXN3-227ENST00000554491 HMGXB3Q12766 1538 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 POM121Q96HA1 1249 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 ALG2Q9H553 416 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
ATXN3-227ENST00000554491 KHNYNO15037 678 aaKnown RBP7.47□□□□□ -1.21
ATXN3-227ENST00000554491 SKIP12755 728 aa7.47□□□□□ -1.21
ATXN3-227ENST00000554491 DGKGP49619 791 aa7.47□□□□□ -1.21
ATXN3-227ENST00000554491 TATP17735 454 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-227ENST00000554491 TXLNAP40222 546 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 GTF2IP78347 998 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 EML3Q32P44 896 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATXN3-227ENST00000554491 ZDHHC1Q8WTX9 485 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 STRN4Q9NRL3 753 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 ZNF358Q9NW07 568 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 ZDHHC3Q9NYG2 299 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 SCHIP1Q9P0W5 487 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-227ENST00000554491 LAMC3Q9Y6N6 1575 aa7.46□□□□□ -1.22
ATXN3-227ENST00000554491 GNB5O14775 395 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 PRKCSHP14314 528 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-227ENST00000554491 ADH6P28332 368 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 BAG6P46379 1132 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
ATXN3-227ENST00000554491 NCOA4Q13772 614 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 FAM182BQ5T319 152 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 ERICH6Q7L0X2 663 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 NOD1Q9Y239 953 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 RIMBP3CA6NJZ7 1639 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 RIMBP3BA6NNM3 1639 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 RIMBP3Q9UFD9 1639 aa7.45□□□□□ -1.22
ATXN3-227ENST00000554491 FAM157BP0CG42 384 aa7.44□□□□□ -1.22
ATXN3-227ENST00000554491 PSME1Q06323 249 aa7.44□□□□□ -1.22
ATXN3-227ENST00000554491 TBCELQ5QJ74 424 aa7.44□□□□□ -1.22
ATXN3-227ENST00000554491 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
ATXN3-227ENST00000554491 EPHA4P54764 986 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
ATXN3-227ENST00000554491 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 L3MBTL2Q969R5 705 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 GJA3Q9Y6H8 435 aa7.43□□□□□ -1.22
ATXN3-227ENST00000554491 USP17L5A8MUK1 530 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 BACH1O14867 736 aa7.42□□□□□ -1.22
ATXN3-227ENST00000554491 EFSO43281 561 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms