RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SH3PXD2AQ5TCZ1 1133 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 MEIOBQ8N635 442 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 TRIM52Q96A61 297 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 INSM2Q96T92 566 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 IQSEC3Q9UPP2 1182 aaPredicted RBP9.15□□□□□ -0.94
CHD8-207ENST00000554384 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
CHD8-207ENST00000554384 IGFBP4P22692 258 aa9.14□□□□□ -0.95
CHD8-207ENST00000554384 MTFR1Q15390 333 aa9.14□□□□□ -0.95
CHD8-207ENST00000554384 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
CHD8-207ENST00000554384 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
CHD8-207ENST00000554384 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
CHD8-207ENST00000554384 H3BM21 787 aa9.12□□□□□ -0.95
CHD8-207ENST00000554384 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
CHD8-207ENST00000554384 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
CHD8-207ENST00000554384 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD8-207ENST00000554384 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
CHD8-207ENST00000554384 SAP130Q9H0E3 1048 aa9.12□□□□□ -0.95
CHD8-207ENST00000554384 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
CHD8-207ENST00000554384 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
CHD8-207ENST00000554384 SOWAHDA6NJG2 315 aa9.11□□□□□ -0.95
CHD8-207ENST00000554384 SOBPA7XYQ1 873 aa9.11□□□□□ -0.95
CHD8-207ENST00000554384 CDK2AP1O14519 115 aa9.11□□□□□ -0.95
CHD8-207ENST00000554384 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
CHD8-207ENST00000554384 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
CHD8-207ENST00000554384 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
CHD8-207ENST00000554384 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
CHD8-207ENST00000554384 IRF7Q92985 503 aa9.1□□□□□ -0.95
CHD8-207ENST00000554384 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
CHD8-207ENST00000554384 HCN4Q9Y3Q4 1203 aa9.1□□□□□ -0.95
CHD8-207ENST00000554384 FOXO3O43524 673 aa9.09□□□□□ -0.95
CHD8-207ENST00000554384 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
CHD8-207ENST00000554384 NGLY1Q96IV0 654 aa9.09□□□□□ -0.95
CHD8-207ENST00000554384 ZSCAN10Q96SZ4 725 aaPredicted RBP9.09□□□□□ -0.95
CHD8-207ENST00000554384 TSEN34Q9BSV6 310 aaKnown RBP9.09□□□□□ -0.95
CHD8-207ENST00000554384 POLMQ9NP87 494 aaPredicted RBP9.09□□□□□ -0.95
CHD8-207ENST00000554384 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
CHD8-207ENST00000554384 SPINT1O43278 529 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 BMP2P12643 396 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 FOXD4L5Q5VV16 416 aaPredicted RBP9.08□□□□□ -0.96
CHD8-207ENST00000554384 TMEM214Q6NUQ4 689 aaKnown RBP9.08□□□□□ -0.96
CHD8-207ENST00000554384 VTI1AQ96AJ9 217 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 ZNF232Q9UNY5 417 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
CHD8-207ENST00000554384 H3BRB1 525 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 EML1O00423 815 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 PHKA2P46019 1235 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 PSMA6P60900 246 aaKnown RBP9.07□□□□□ -0.96
CHD8-207ENST00000554384 ECM1Q16610 540 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
CHD8-207ENST00000554384 L3MBTL2Q969R5 705 aa9.07□□□□□ -0.96
CHD8-207ENST00000554384 TUT1Q9H6E5 874 aaKnown RBP9.07□□□□□ -0.96
CHD8-207ENST00000554384 BIN2Q9UBW5 565 aaPredicted RBP9.07□□□□□ -0.96
CHD8-207ENST00000554384 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 ICMTO60725 284 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 NOS2P35228 1153 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 SCARF1Q14162 830 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 ZSCAN1Q8NBB4 408 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 KLRG1Q96E93 195 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
CHD8-207ENST00000554384 LRFN2Q9ULH4 789 aa9.06□□□□□ -0.96
CHD8-207ENST00000554384 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 PTCD1O75127 700 aaKnown RBP9.05□□□□□ -0.96
CHD8-207ENST00000554384 TXLNAP40222 546 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 RNF144AP50876 292 aaPredicted RBP9.05□□□□□ -0.96
CHD8-207ENST00000554384 POU4F2Q12837 409 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 TEAD4Q15561 434 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 CCDC27Q2M243 656 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 C4orf17Q53FE4 359 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 FAM26DQ5JW98 314 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 COX20Q5RI15 118 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 PRICKLE2Q7Z3G6 844 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 RGS22Q8NE09 1264 aa9.05□□□□□ -0.96
CHD8-207ENST00000554384 FOXD4L4Q8WXT5 416 aaPredicted RBP9.05□□□□□ -0.96
CHD8-207ENST00000554384 RHOQP17081 205 aa9.04□□□□□ -0.96
CHD8-207ENST00000554384 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
CHD8-207ENST00000554384 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
CHD8-207ENST00000554384 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 UPP2O95045 317 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 PLA2G4AP47712 749 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 FKBP4Q02790 459 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHD8-207ENST00000554384 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
CHD8-207ENST00000554384 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 ALDH16A1Q8IZ83 802 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
CHD8-207ENST00000554384 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 RHBDD1Q8TEB9 315 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 AIDAQ96BJ3 306 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 PHACTR1Q9C0D0 580 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 KLK14Q9P0G3 267 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
CHD8-207ENST00000554384 ZBTB39O15060 712 aa9.01□□□□□ -0.97
CHD8-207ENST00000554384 MPSTP25325 297 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms