RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 EIF4A1P60842 406 aaKnown RBP12.09□□□□□ -0.47
NUMB-208ENST00000554014 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
NUMB-208ENST00000554014 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
NUMB-208ENST00000554014 PLSCR1O15162 318 aa12.08□□□□□ -0.47
NUMB-208ENST00000554014 PTCD1O75127 700 aaKnown RBP12.08□□□□□ -0.47
NUMB-208ENST00000554014 KCNQ4P56696 695 aa12.08□□□□□ -0.47
NUMB-208ENST00000554014 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.47
NUMB-208ENST00000554014 PROM2Q8N271 834 aa12.08□□□□□ -0.47
NUMB-208ENST00000554014 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.47
NUMB-208ENST00000554014 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 SIK1P57059 783 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
NUMB-208ENST00000554014 E9PSI1 815 aa12.07□□□□□ -0.48
NUMB-208ENST00000554014 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
NUMB-208ENST00000554014 ITPK1Q13572 414 aa12.07□□□□□ -0.48
NUMB-208ENST00000554014 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
NUMB-208ENST00000554014 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
NUMB-208ENST00000554014 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
NUMB-208ENST00000554014 EZH2Q15910 746 aaKnown RBP12.06□□□□□ -0.48
NUMB-208ENST00000554014 TXNRD1Q16881 649 aa12.06□□□□□ -0.48
NUMB-208ENST00000554014 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
NUMB-208ENST00000554014 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
NUMB-208ENST00000554014 BAG6P46379 1132 aa12.06□□□□□ -0.48
NUMB-208ENST00000554014 SF3B2Q13435 895 aaKnown RBP12.06□□□□□ -0.48
NUMB-208ENST00000554014 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
NUMB-208ENST00000554014 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
NUMB-208ENST00000554014 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
NUMB-208ENST00000554014 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 GIGYF1O75420 1035 aaPredicted RBP12.05□□□□□ -0.48
NUMB-208ENST00000554014 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
NUMB-208ENST00000554014 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 LINC00116Q8NCU8 138 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
NUMB-208ENST00000554014 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
NUMB-208ENST00000554014 ATP6V1AP38606 617 aa12.03□□□□□ -0.48
NUMB-208ENST00000554014 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
NUMB-208ENST00000554014 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
NUMB-208ENST00000554014 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
NUMB-208ENST00000554014 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
NUMB-208ENST00000554014 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
NUMB-208ENST00000554014 SCN7AQ01118 1682 aa12.02□□□□□ -0.48
NUMB-208ENST00000554014 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.49
NUMB-208ENST00000554014 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
NUMB-208ENST00000554014 HOXB7P09629 217 aa12.01□□□□□ -0.49
NUMB-208ENST00000554014 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
NUMB-208ENST00000554014 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
NUMB-208ENST00000554014 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
NUMB-208ENST00000554014 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
NUMB-208ENST00000554014 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
NUMB-208ENST00000554014 ARFGEF2Q9Y6D5 1785 aa12□□□□□ -0.49
NUMB-208ENST00000554014 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
NUMB-208ENST00000554014 VAMP4O75379 141 aa12□□□□□ -0.49
NUMB-208ENST00000554014 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
NUMB-208ENST00000554014 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
NUMB-208ENST00000554014 NECTIN2Q92692 538 aa12□□□□□ -0.49
NUMB-208ENST00000554014 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
NUMB-208ENST00000554014 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
NUMB-208ENST00000554014 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 A1BGP04217 495 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
NUMB-208ENST00000554014 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
NUMB-208ENST00000554014 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
NUMB-208ENST00000554014 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
NUMB-208ENST00000554014 PDIA6Q15084 440 aa11.98□□□□□ -0.49
NUMB-208ENST00000554014 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
NUMB-208ENST00000554014 LRP10Q7Z4F1 713 aa11.98□□□□□ -0.49
NUMB-208ENST00000554014 TEX13AQ9BXU3 409 aaPredicted RBP11.98□□□□□ -0.49
NUMB-208ENST00000554014 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
NUMB-208ENST00000554014 NUP98P52948 1817 aa11.98□□□□□ -0.49
NUMB-208ENST00000554014 SOCS7O14512 581 aa11.97□□□□□ -0.49
NUMB-208ENST00000554014 STARD3NLO95772 234 aa11.97□□□□□ -0.49
NUMB-208ENST00000554014 ANXA1P04083 346 aa11.97□□□□□ -0.49
NUMB-208ENST00000554014 CHPF2Q9P2E5 772 aa11.97□□□□□ -0.49
NUMB-208ENST00000554014 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
NUMB-208ENST00000554014 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
NUMB-208ENST00000554014 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
NUMB-208ENST00000554014 COL15A1P39059 1388 aa11.96□□□□□ -0.49
NUMB-208ENST00000554014 GNPATO15228 680 aa11.96□□□□□ -0.49
NUMB-208ENST00000554014 AK7Q96M32 723 aa11.96□□□□□ -0.49
NUMB-208ENST00000554014 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
NUMB-208ENST00000554014 COL24A1Q17RW2 1714 aa11.96□□□□□ -0.5
NUMB-208ENST00000554014 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
NUMB-208ENST00000554014 DDX21Q9NR30 783 aaKnown RBP eCLIP11.95□□□□□ -0.5
NUMB-208ENST00000554014 SRCAPQ6ZRS2 3230 aa11.95□□□□□ -0.5
NUMB-208ENST00000554014 CT47B1P0C2W7 299 aaPredicted RBP11.94□□□□□ -0.5
NUMB-208ENST00000554014 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
NUMB-208ENST00000554014 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
NUMB-208ENST00000554014 RPS6KA4O75676 772 aa11.94□□□□□ -0.5
NUMB-208ENST00000554014 MYL6BP14649 208 aa11.94□□□□□ -0.5
NUMB-208ENST00000554014 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms