RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-208ENST00000553753 MMP10P09238 476 aa13.47□□□□□ -0.25
HNRNPC-208ENST00000553753 RIPK4P57078 832 aa13.47□□□□□ -0.25
HNRNPC-208ENST00000553753 CD2APQ9Y5K6 639 aa13.47□□□□□ -0.25
HNRNPC-208ENST00000553753 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 MIS18AQ9NYP9 233 aa13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-208ENST00000553753 ZPR1O75312 459 aa13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 COL15A1P39059 1388 aa13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 USP16Q9Y5T5 823 aa13.45□□□□□ -0.26
HNRNPC-208ENST00000553753 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-208ENST00000553753 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
HNRNPC-208ENST00000553753 FKBP8Q14318 412 aa13.44□□□□□ -0.26
HNRNPC-208ENST00000553753 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
HNRNPC-208ENST00000553753 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 A1BGP04217 495 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 GPR162Q16538 588 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 PARP3Q9Y6F1 533 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 ANP32CO43423 234 aa13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-208ENST00000553753 A0A087WZG4 1122 aa13.42□□□□□ -0.26
HNRNPC-208ENST00000553753 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-208ENST00000553753 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-208ENST00000553753 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-208ENST00000553753 TM4SF1P30408 202 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
HNRNPC-208ENST00000553753 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
HNRNPC-208ENST00000553753 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
HNRNPC-208ENST00000553753 DDR1Q08345 913 aa13.39□□□□□ -0.27
HNRNPC-208ENST00000553753 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-208ENST00000553753 TGFB2P61812 414 aa13.38□□□□□ -0.27
HNRNPC-208ENST00000553753 NFIXQ14938 502 aa13.38□□□□□ -0.27
HNRNPC-208ENST00000553753 APAF1O14727 1248 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 YBX3P16989 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 YY1P25490 414 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 NBPF26B4DH59 902 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
HNRNPC-208ENST00000553753 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
HNRNPC-208ENST00000553753 A0A0G2JLW4 131 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 CHL1O00533 1208 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 SERPINB2P05120 415 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
HNRNPC-208ENST00000553753 PXDNLA1KZ92 1463 aa13.34□□□□□ -0.27
HNRNPC-208ENST00000553753 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
HNRNPC-208ENST00000553753 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
HNRNPC-208ENST00000553753 DPEP1P16444 411 aa13.33□□□□□ -0.28
HNRNPC-208ENST00000553753 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
HNRNPC-208ENST00000553753 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
HNRNPC-208ENST00000553753 CHD4Q14839 1912 aa13.33□□□□□ -0.28
HNRNPC-208ENST00000553753 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 RGL2O15211 777 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 MYL6BP14649 208 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 EIF2S2P20042 333 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 KCNA3P22001 575 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 CALD1Q05682 793 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 NGEFQ8N5V2 710 aa13.32□□□□□ -0.28
HNRNPC-208ENST00000553753 CARMIL3Q8ND23 1372 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 AFDNP55196 1824 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 BCS1LQ9Y276 419 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
HNRNPC-208ENST00000553753 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 ZNF853P0CG23 659 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 CHRNA5P30532 468 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
HNRNPC-208ENST00000553753 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms