RNA–Protein interactions for RNA: ENST00000553531.1

PTPN21-203, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-203ENST00000553531 RTF1Q92541 710 aaKnown RBP15.87■□□□□ 0.13
PTPN21-203ENST00000553531 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
PTPN21-203ENST00000553531 CHD4Q14839 1912 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 BCORQ6W2J9 1755 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
PTPN21-203ENST00000553531 UTRNP46939 3433 aa15.87■□□□□ 0.13
PTPN21-203ENST00000553531 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
PTPN21-203ENST00000553531 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
PTPN21-203ENST00000553531 MMP10P09238 476 aa15.86■□□□□ 0.13
PTPN21-203ENST00000553531 RFC4P35249 363 aa15.86■□□□□ 0.13
PTPN21-203ENST00000553531 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
PTPN21-203ENST00000553531 CD2APQ9Y5K6 639 aa15.86■□□□□ 0.13
PTPN21-203ENST00000553531 EIF5P55010 431 aaKnown RBP15.85■□□□□ 0.13
PTPN21-203ENST00000553531 FKBP8Q14318 412 aa15.85■□□□□ 0.13
PTPN21-203ENST00000553531 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
PTPN21-203ENST00000553531 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
PTPN21-203ENST00000553531 DDR1Q08345 913 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
PTPN21-203ENST00000553531 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
PTPN21-203ENST00000553531 YBX3P16989 372 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPN21-203ENST00000553531 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.12
PTPN21-203ENST00000553531 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
PTPN21-203ENST00000553531 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
PTPN21-203ENST00000553531 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
PTPN21-203ENST00000553531 GOLGB1Q14789 3259 aaKnown RBP15.83■□□□□ 0.12
PTPN21-203ENST00000553531 STARD3NLO95772 234 aa15.82■□□□□ 0.12
PTPN21-203ENST00000553531 A1BGP04217 495 aa15.82■□□□□ 0.12
PTPN21-203ENST00000553531 TM4SF1P30408 202 aa15.82■□□□□ 0.12
PTPN21-203ENST00000553531 USPL1Q5W0Q7 1092 aa15.82■□□□□ 0.12
PTPN21-203ENST00000553531 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
PTPN21-203ENST00000553531 NEFMP07197 916 aa15.81■□□□□ 0.12
PTPN21-203ENST00000553531 TEX13AQ9BXU3 409 aaPredicted RBP15.81■□□□□ 0.12
PTPN21-203ENST00000553531 RIPK4P57078 832 aa15.8■□□□□ 0.12
PTPN21-203ENST00000553531 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
PTPN21-203ENST00000553531 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
PTPN21-203ENST00000553531 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
PTPN21-203ENST00000553531 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
PTPN21-203ENST00000553531 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
PTPN21-203ENST00000553531 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
PTPN21-203ENST00000553531 IL6STP40189 918 aaPredicted RBP15.79■□□□□ 0.12
PTPN21-203ENST00000553531 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
PTPN21-203ENST00000553531 NBPF10Q6P3W6 841 aaKnown RBP15.79■□□□□ 0.12
PTPN21-203ENST00000553531 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
PTPN21-203ENST00000553531 RUNDC1Q96C34 613 aa15.79■□□□□ 0.12
PTPN21-203ENST00000553531 DLEC1Q9Y238 1755 aa15.79■□□□□ 0.12
PTPN21-203ENST00000553531 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
PTPN21-203ENST00000553531 NFIXQ14938 502 aa15.78■□□□□ 0.12
PTPN21-203ENST00000553531 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPN21-203ENST00000553531 ZPR1O75312 459 aa15.77■□□□□ 0.12
PTPN21-203ENST00000553531 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
PTPN21-203ENST00000553531 GPR162Q16538 588 aa15.77■□□□□ 0.12
PTPN21-203ENST00000553531 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
PTPN21-203ENST00000553531 PARP3Q9Y6F1 533 aa15.77■□□□□ 0.12
PTPN21-203ENST00000553531 ARFGEF1Q9Y6D6 1849 aa15.77■□□□□ 0.11
PTPN21-203ENST00000553531 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
PTPN21-203ENST00000553531 CAMTA2O94983 1202 aa15.76■□□□□ 0.11
PTPN21-203ENST00000553531 TBC1D2BQ9UPU7 963 aa15.76■□□□□ 0.11
PTPN21-203ENST00000553531 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
PTPN21-203ENST00000553531 COL11A2P13942 1736 aaPredicted RBP15.75■□□□□ 0.11
PTPN21-203ENST00000553531 KCNA3P22001 575 aa15.75■□□□□ 0.11
PTPN21-203ENST00000553531 YY1P25490 414 aa15.75■□□□□ 0.11
PTPN21-203ENST00000553531 NUP98P52948 1817 aa15.74■□□□□ 0.11
PTPN21-203ENST00000553531 A0A087WZG4 1122 aa15.74■□□□□ 0.11
PTPN21-203ENST00000553531 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
PTPN21-203ENST00000553531 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
PTPN21-203ENST00000553531 PELP1Q8IZL8 1130 aaKnown RBP15.74■□□□□ 0.11
PTPN21-203ENST00000553531 WWC3Q9ULE0 1092 aa15.74■□□□□ 0.11
PTPN21-203ENST00000553531 A0A0G2JLW4 131 aa15.73■□□□□ 0.11
PTPN21-203ENST00000553531 DPEP1P16444 411 aa15.73■□□□□ 0.11
PTPN21-203ENST00000553531 TGFB2P61812 414 aa15.73■□□□□ 0.11
PTPN21-203ENST00000553531 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
PTPN21-203ENST00000553531 ZNF330Q9Y3S2 320 aaPredicted RBP15.73■□□□□ 0.11
PTPN21-203ENST00000553531 CHL1O00533 1208 aa15.72■□□□□ 0.11
PTPN21-203ENST00000553531 APAF1O14727 1248 aa15.72■□□□□ 0.11
PTPN21-203ENST00000553531 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
PTPN21-203ENST00000553531 BABAM1Q9NWV8 329 aa15.72■□□□□ 0.11
PTPN21-203ENST00000553531 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
PTPN21-203ENST00000553531 SERPINB2P05120 415 aa15.71■□□□□ 0.11
PTPN21-203ENST00000553531 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
PTPN21-203ENST00000553531 LRP10Q7Z4F1 713 aa15.71■□□□□ 0.11
PTPN21-203ENST00000553531 GRIN3BO60391 1043 aa15.7■□□□□ 0.1
PTPN21-203ENST00000553531 PDIA6Q15084 440 aa15.7■□□□□ 0.1
PTPN21-203ENST00000553531 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
PTPN21-203ENST00000553531 CHRNA5P30532 468 aa15.69■□□□□ 0.1
PTPN21-203ENST00000553531 BICDL1Q6ZP65 573 aa15.69■□□□□ 0.1
PTPN21-203ENST00000553531 HLFQ16534 295 aa15.68■□□□□ 0.1
PTPN21-203ENST00000553531 ADCY9O60503 1353 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 RGL2O15211 777 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 ANP32CO43423 234 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 PRR5LQ6MZQ0 368 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 ARFGEF2Q9Y6D5 1785 aa15.67■□□□□ 0.1
PTPN21-203ENST00000553531 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms