RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
LINC00517-201ENST00000553396 RFC4P35249 363 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
LINC00517-201ENST00000553396 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
LINC00517-201ENST00000553396 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC00517-201ENST00000553396 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
LINC00517-201ENST00000553396 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
LINC00517-201ENST00000553396 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
LINC00517-201ENST00000553396 ZBTB1Q9Y2K1 713 aa13.5□□□□□ -0.25
LINC00517-201ENST00000553396 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
LINC00517-201ENST00000553396 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
LINC00517-201ENST00000553396 COL15A1P39059 1388 aa13.48□□□□□ -0.25
LINC00517-201ENST00000553396 MMP10P09238 476 aa13.48□□□□□ -0.25
LINC00517-201ENST00000553396 GYS1P13807 737 aa13.48□□□□□ -0.25
LINC00517-201ENST00000553396 CANXP27824 592 aaKnown RBP13.48□□□□□ -0.25
LINC00517-201ENST00000553396 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
LINC00517-201ENST00000553396 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
LINC00517-201ENST00000553396 UTRNP46939 3433 aa13.48□□□□□ -0.25
LINC00517-201ENST00000553396 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
LINC00517-201ENST00000553396 STARD3NLO95772 234 aa13.47□□□□□ -0.25
LINC00517-201ENST00000553396 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
LINC00517-201ENST00000553396 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
LINC00517-201ENST00000553396 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
LINC00517-201ENST00000553396 PRAMEF22A3QJZ6 481 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 KCNA4P22459 653 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 RIPK4P57078 832 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
LINC00517-201ENST00000553396 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
LINC00517-201ENST00000553396 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 ZPR1O75312 459 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
LINC00517-201ENST00000553396 FKBP8Q14318 412 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 GPR162Q16538 588 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
LINC00517-201ENST00000553396 CD2APQ9Y5K6 639 aa13.45□□□□□ -0.26
LINC00517-201ENST00000553396 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 A1BGP04217 495 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
LINC00517-201ENST00000553396 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
LINC00517-201ENST00000553396 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 USP16Q9Y5T5 823 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 PARP3Q9Y6F1 533 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
LINC00517-201ENST00000553396 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
LINC00517-201ENST00000553396 CHD4Q14839 1912 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
LINC00517-201ENST00000553396 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
LINC00517-201ENST00000553396 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
LINC00517-201ENST00000553396 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
LINC00517-201ENST00000553396 NARFQ9UHQ1 456 aa13.43□□□□□ -0.26
LINC00517-201ENST00000553396 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
LINC00517-201ENST00000553396 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
LINC00517-201ENST00000553396 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
LINC00517-201ENST00000553396 ANP32CO43423 234 aa13.42□□□□□ -0.26
LINC00517-201ENST00000553396 DDR1Q08345 913 aa13.42□□□□□ -0.26
LINC00517-201ENST00000553396 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
LINC00517-201ENST00000553396 BCORQ6W2J9 1755 aa13.41□□□□□ -0.26
LINC00517-201ENST00000553396 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
LINC00517-201ENST00000553396 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
LINC00517-201ENST00000553396 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
LINC00517-201ENST00000553396 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
LINC00517-201ENST00000553396 A0A087WZG4 1122 aa13.4□□□□□ -0.26
LINC00517-201ENST00000553396 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00517-201ENST00000553396 YY1P25490 414 aa13.4□□□□□ -0.26
LINC00517-201ENST00000553396 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
LINC00517-201ENST00000553396 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
LINC00517-201ENST00000553396 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
LINC00517-201ENST00000553396 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
LINC00517-201ENST00000553396 NFIXQ14938 502 aa13.39□□□□□ -0.27
LINC00517-201ENST00000553396 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
LINC00517-201ENST00000553396 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
LINC00517-201ENST00000553396 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 APAF1O14727 1248 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
LINC00517-201ENST00000553396 TM4SF1P30408 202 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
LINC00517-201ENST00000553396 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
LINC00517-201ENST00000553396 NRXN2Q9P2S2 1712 aa13.38□□□□□ -0.27
LINC00517-201ENST00000553396 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
LINC00517-201ENST00000553396 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
LINC00517-201ENST00000553396 A0A0G2JLW4 131 aa13.37□□□□□ -0.27
LINC00517-201ENST00000553396 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
LINC00517-201ENST00000553396 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
LINC00517-201ENST00000553396 DPEP1P16444 411 aa13.36□□□□□ -0.27
LINC00517-201ENST00000553396 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
LINC00517-201ENST00000553396 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
LINC00517-201ENST00000553396 SERPINB2P05120 415 aa13.35□□□□□ -0.27
LINC00517-201ENST00000553396 TGFB2P61812 414 aa13.35□□□□□ -0.27
LINC00517-201ENST00000553396 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
LINC00517-201ENST00000553396 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms