RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SV2AQ7L0J3 742 aa8.5□□□□□ -1.05
SCFD1-209ENST00000553280 CUEDC1Q9NWM3 386 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-209ENST00000553280 SOWAHDA6NJG2 315 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 E9PSI1 815 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 GNRH1P01148 92 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 IL2RAP01589 272 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 CNKSR1Q969H4 720 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 GRIP2Q9C0E4 1043 aa8.49□□□□□ -1.05
SCFD1-209ENST00000553280 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
SCFD1-209ENST00000553280 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
SCFD1-209ENST00000553280 CENPCQ03188 943 aa8.47□□□□□ -1.05
SCFD1-209ENST00000553280 OCLNQ16625 522 aa8.47□□□□□ -1.05
SCFD1-209ENST00000553280 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
SCFD1-209ENST00000553280 TAS1R3Q7RTX0 852 aa8.47□□□□□ -1.05
SCFD1-209ENST00000553280 GAS2L1Q99501 681 aaPredicted RBP8.47□□□□□ -1.05
SCFD1-209ENST00000553280 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
SCFD1-209ENST00000553280 FAM181BA6NEQ2 426 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 PRMT3O60678 531 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 ERCC3P19447 782 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 SERPINB4P48594 390 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 NBPF10Q6P3W6 841 aaKnown RBP8.46□□□□□ -1.06
SCFD1-209ENST00000553280 NBPF15Q8N660 670 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 TPCN2Q8NHX9 752 aa8.46□□□□□ -1.06
SCFD1-209ENST00000553280 CXXC1Q9P0U4 656 aaPredicted RBP8.46□□□□□ -1.06
SCFD1-209ENST00000553280 PHKA2P46019 1235 aa8.45□□□□□ -1.06
SCFD1-209ENST00000553280 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
SCFD1-209ENST00000553280 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-209ENST00000553280 SCNN1AP37088 669 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 PSME1Q06323 249 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 ESCO1Q5FWF5 840 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 DNAJC14Q6Y2X3 702 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-209ENST00000553280 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-209ENST00000553280 XAGE2Q96GT9 111 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-209ENST00000553280 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 DYRK1BQ9Y463 629 aa8.44□□□□□ -1.06
SCFD1-209ENST00000553280 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
SCFD1-209ENST00000553280 SPATA31C2B4DYI2 1134 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 M0R2N6 131 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 GPR25O00155 361 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 DBN1Q16643 649 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 EGFL7Q9UHF1 273 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 HRH3Q9Y5N1 445 aa8.43□□□□□ -1.06
SCFD1-209ENST00000553280 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
SCFD1-209ENST00000553280 TRIM22Q8IYM9 498 aa8.42□□□□□ -1.06
SCFD1-209ENST00000553280 HINFPQ9BQA5 517 aa8.42□□□□□ -1.06
SCFD1-209ENST00000553280 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-209ENST00000553280 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-209ENST00000553280 WEE1P30291 646 aa8.41□□□□□ -1.06
SCFD1-209ENST00000553280 TLR1Q15399 786 aa8.41□□□□□ -1.06
SCFD1-209ENST00000553280 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
SCFD1-209ENST00000553280 SCNN1DP51172 638 aa8.4□□□□□ -1.06
SCFD1-209ENST00000553280 GDF10P55107 478 aa8.4□□□□□ -1.06
SCFD1-209ENST00000553280 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
SCFD1-209ENST00000553280 C4orf17Q53FE4 359 aa8.4□□□□□ -1.06
SCFD1-209ENST00000553280 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
SCFD1-209ENST00000553280 GTPBP3Q969Y2 492 aaKnown RBP8.4□□□□□ -1.06
SCFD1-209ENST00000553280 BIN2Q9UBW5 565 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-209ENST00000553280 GAS6Q14393 721 aa8.39□□□□□ -1.07
SCFD1-209ENST00000553280 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
SCFD1-209ENST00000553280 WDR44Q5JSH3 913 aa8.39□□□□□ -1.07
SCFD1-209ENST00000553280 TSEN2Q8NCE0 465 aaKnown RBP8.39□□□□□ -1.07
SCFD1-209ENST00000553280 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
SCFD1-209ENST00000553280 H7C1W4 665 aa8.38□□□□□ -1.07
SCFD1-209ENST00000553280 ICMTO60725 284 aa8.38□□□□□ -1.07
SCFD1-209ENST00000553280 F11P03951 625 aa8.38□□□□□ -1.07
SCFD1-209ENST00000553280 INHAP05111 366 aa8.38□□□□□ -1.07
SCFD1-209ENST00000553280 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
SCFD1-209ENST00000553280 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
SCFD1-209ENST00000553280 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
SCFD1-209ENST00000553280 ABL1P00519 1130 aa8.37□□□□□ -1.07
SCFD1-209ENST00000553280 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-209ENST00000553280 FOXR1Q6PIV2 292 aa8.37□□□□□ -1.07
SCFD1-209ENST00000553280 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
SCFD1-209ENST00000553280 GTF3C2Q8WUA4 911 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-209ENST00000553280 GMCL1Q96IK5 515 aa8.37□□□□□ -1.07
SCFD1-209ENST00000553280 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
SCFD1-209ENST00000553280 UNCXA6NJT0 531 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 LGR5O75473 907 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 PPARGC1BQ86YN6 1023 aaKnown RBP8.36□□□□□ -1.07
SCFD1-209ENST00000553280 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 ZNF358Q9NW07 568 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
SCFD1-209ENST00000553280 A0A1B0GTH6 734 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 TMEM229AB2RXF0 380 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 PTCD1O75127 700 aaKnown RBP8.35□□□□□ -1.07
SCFD1-209ENST00000553280 THBS1P07996 1170 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 SLURP2P0DP57 97 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCFD1-209ENST00000553280 FKBP5Q13451 457 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-209ENST00000553280 ECM1Q16610 540 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 RUBCNLQ9H714 662 aa8.35□□□□□ -1.07
SCFD1-209ENST00000553280 H3BRB1 525 aa8.34□□□□□ -1.07
SCFD1-209ENST00000553280 BACH1O14867 736 aa8.34□□□□□ -1.07
SCFD1-209ENST00000553280 C21orf2O43822 256 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms