RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 HFM1A2PYH4 1435 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 TECPR2O15040 1411 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 SBF2Q86WG5 1849 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 MYO5BQ9ULV0 1848 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 KDM2BQ8NHM5 1336 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 ZC3H4Q9UPT8 1303 aaKnown RBP6.22□□□□□ -1.41
PFDN5-219ENST00000553171 PEAK1Q9H792 1746 aa6.22□□□□□ -1.41
PFDN5-219ENST00000553171 ARHGEF10O15013 1369 aa6.21□□□□□ -1.41
PFDN5-219ENST00000553171 ST18O60284 1047 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 ZRANB2O95218 330 aaKnown RBP eCLIP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 LIG1P18858 919 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 ARID4AP29374 1257 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 VEGFBP49765 207 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 PSME1Q06323 249 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 UTP14CQ5TAP6 766 aaKnown RBP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 NBPF6Q5VWK0 638 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 KRBA2Q6ZNG9 492 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 NBPF5PQ86XG9 351 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 SMAP1Q8IYB5 467 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 NBPF4Q96M43 638 aa6.21□□□□□ -1.42
PFDN5-219ENST00000553171 PHRF1Q9P1Y6 1649 aaKnown RBP6.21□□□□□ -1.42
PFDN5-219ENST00000553171 MEGF6O75095 1541 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 SBNO1A3KN83 1393 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 ARHGEF5Q12774 1597 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 BCL9O00512 1426 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 VPS8Q8N3P4 1428 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 CCER2I3L3R5 266 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 LONRF3Q496Y0 759 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 CDCA8Q53HL2 280 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 NBPF10Q6P3W6 841 aaKnown RBP6.2□□□□□ -1.42
PFDN5-219ENST00000553171 TCP11L2Q8N4U5 519 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
PFDN5-219ENST00000553171 SUGT1Q9Y2Z0 365 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 PAPPAQ13219 1627 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 ADAMTS7Q9UKP4 1686 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 LMTK2Q8IWU2 1503 aa6.2□□□□□ -1.42
PFDN5-219ENST00000553171 TESPA1A2RU30 521 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-219ENST00000553171 ANKRD62A6NC57 917 aa6.19□□□□□ -1.42
PFDN5-219ENST00000553171 SEMA3FQ13275 785 aa6.19□□□□□ -1.42
PFDN5-219ENST00000553171 GEMIN8Q9NWZ8 242 aaKnown RBP6.19□□□□□ -1.42
PFDN5-219ENST00000553171 RAI14Q9P0K7 980 aa6.19□□□□□ -1.42
PFDN5-219ENST00000553171 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-219ENST00000553171 THRAP3Q9Y2W1 955 aaKnown RBP6.19□□□□□ -1.42
PFDN5-219ENST00000553171 TOPAZ1Q8N9V7 1692 aa6.19□□□□□ -1.42
PFDN5-219ENST00000553171 PNPLA7Q6ZV29 1317 aa6.19□□□□□ -1.42
PFDN5-219ENST00000553171 ROBO2Q9HCK4 1378 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 ATP7BP35670 1465 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 TNNT2P45379 298 aaPredicted RBP6.18□□□□□ -1.42
PFDN5-219ENST00000553171 SOX10P56693 466 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 MAP2K1Q02750 393 aaPredicted RBP6.18□□□□□ -1.42
PFDN5-219ENST00000553171 ARMCX6Q7L4S7 300 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 NBPF15Q8N660 670 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 CXorf38Q8TB03 319 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 MORC4Q8TE76 937 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
PFDN5-219ENST00000553171 RBM28Q9NW13 759 aaKnown RBP6.18□□□□□ -1.42
PFDN5-219ENST00000553171 IGSF1Q8N6C5 1336 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 PLEKHG2Q9H7P9 1386 aa6.18□□□□□ -1.42
PFDN5-219ENST00000553171 NRXN3Q9Y4C0 1643 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 KCPQ6ZWJ8 1503 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 ZKSCAN8Q15776 578 aaPredicted RBP6.17□□□□□ -1.42
PFDN5-219ENST00000553171 MIER1Q8N108 512 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 SNX27Q96L92 541 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 MAP7D2Q96T17 732 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 STRN4Q9NRL3 753 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 VIRMAQ69YN4 1812 aaKnown RBP6.17□□□□□ -1.42
PFDN5-219ENST00000553171 BRD4O60885 1362 aaPredicted RBP6.17□□□□□ -1.42
PFDN5-219ENST00000553171 KANK1Q14678 1352 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 GCC2Q8IWJ2 1684 aa6.17□□□□□ -1.42
PFDN5-219ENST00000553171 EXOC5O00471 708 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 RIOK3O14730 519 aaKnown RBP6.16□□□□□ -1.42
PFDN5-219ENST00000553171 FOXD4Q12950 439 aaPredicted RBP6.16□□□□□ -1.42
PFDN5-219ENST00000553171 MTA1Q13330 715 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 CSPP1Q1MSJ5 1256 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 ANKRD23Q86SG2 305 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 CACTIN-AS1Q8N1I8 211 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 PRDM11Q9NQV5 511 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 WDR70Q9NW82 654 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 QSER1Q2KHR3 1735 aa6.16□□□□□ -1.42
PFDN5-219ENST00000553171 SZT2Q5T011 3432 aa6.15□□□□□ -1.42
PFDN5-219ENST00000553171 VEGFAP15692 232 aaPredicted RBP6.15□□□□□ -1.42
PFDN5-219ENST00000553171 C9orf131Q5VYM1 1079 aa6.15□□□□□ -1.42
PFDN5-219ENST00000553171 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.42
PFDN5-219ENST00000553171 SNRNP27Q8WVK2 155 aaKnown RBP6.15□□□□□ -1.42
PFDN5-219ENST00000553171 PRDM6Q9NQX0 595 aa6.15□□□□□ -1.42
PFDN5-219ENST00000553171 LRRC4BQ9NT99 713 aa6.15□□□□□ -1.42
PFDN5-219ENST00000553171 RPS6KL1Q9Y6S9 549 aa6.15□□□□□ -1.42
PFDN5-219ENST00000553171 CASKIN1Q8WXD9 1431 aa6.15□□□□□ -1.43
PFDN5-219ENST00000553171 CDC42BPGQ6DT37 1551 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 TNRC6CQ9HCJ0 1690 aaKnown RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 PARP4Q9UKK3 1724 aaKnown RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 GOLGA6CA6NDK9 693 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 GOLGA6BA6NDN3 693 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 GOLGA6L3A6NEY3 463 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 GOLGA6DP0CG33 693 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 VASPP50552 380 aaPredicted RBP6.14□□□□□ -1.43
PFDN5-219ENST00000553171 SATB1Q01826 763 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 DGKZQ13574 1117 aa6.14□□□□□ -1.43
PFDN5-219ENST00000553171 ZNF280DQ6N043 979 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms