RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
RFX4-212ENST00000552917 FKBP8Q14318 412 aa16.19■□□□□ 0.18
RFX4-212ENST00000552917 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
RFX4-212ENST00000552917 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
RFX4-212ENST00000552917 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
RFX4-212ENST00000552917 COL15A1P39059 1388 aa16.17■□□□□ 0.18
RFX4-212ENST00000552917 EIF5P55010 431 aaKnown RBP16.17■□□□□ 0.18
RFX4-212ENST00000552917 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
RFX4-212ENST00000552917 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
RFX4-212ENST00000552917 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
RFX4-212ENST00000552917 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
RFX4-212ENST00000552917 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
RFX4-212ENST00000552917 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
RFX4-212ENST00000552917 PNISRQ8TF01 805 aaKnown RBP16.16■□□□□ 0.18
RFX4-212ENST00000552917 UTRNP46939 3433 aa16.16■□□□□ 0.18
RFX4-212ENST00000552917 A0A087WZG4 1122 aa16.15■□□□□ 0.18
RFX4-212ENST00000552917 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
RFX4-212ENST00000552917 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
RFX4-212ENST00000552917 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
RFX4-212ENST00000552917 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
RFX4-212ENST00000552917 A1BGP04217 495 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 TM4SF1P30408 202 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 RIPK4P57078 832 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 TGFB2P61812 414 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 DDR1Q08345 913 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
RFX4-212ENST00000552917 THUMPD2Q9BTF0 503 aaKnown RBP16.14■□□□□ 0.17
RFX4-212ENST00000552917 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
RFX4-212ENST00000552917 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
RFX4-212ENST00000552917 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
RFX4-212ENST00000552917 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
RFX4-212ENST00000552917 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
RFX4-212ENST00000552917 PRAMEF22A3QJZ6 481 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
RFX4-212ENST00000552917 LMOD3Q0VAK6 560 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 NFIXQ14938 502 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
RFX4-212ENST00000552917 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
RFX4-212ENST00000552917 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
RFX4-212ENST00000552917 A0A0G2JLW4 131 aa16.1■□□□□ 0.17
RFX4-212ENST00000552917 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
RFX4-212ENST00000552917 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
RFX4-212ENST00000552917 PXDNLA1KZ92 1463 aa16.1■□□□□ 0.17
RFX4-212ENST00000552917 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
RFX4-212ENST00000552917 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
RFX4-212ENST00000552917 SERPINB2P05120 415 aa16.08■□□□□ 0.16
RFX4-212ENST00000552917 DPEP1P16444 411 aa16.08■□□□□ 0.16
RFX4-212ENST00000552917 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
RFX4-212ENST00000552917 NEUROD2Q15784 382 aa16.08■□□□□ 0.16
RFX4-212ENST00000552917 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
RFX4-212ENST00000552917 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
RFX4-212ENST00000552917 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.16
RFX4-212ENST00000552917 NBPF26B4DH59 902 aa16.07■□□□□ 0.16
RFX4-212ENST00000552917 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
RFX4-212ENST00000552917 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
RFX4-212ENST00000552917 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
RFX4-212ENST00000552917 NBPF15Q8N660 670 aa16.07■□□□□ 0.16
RFX4-212ENST00000552917 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
RFX4-212ENST00000552917 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
RFX4-212ENST00000552917 KCNA3P22001 575 aa16.05■□□□□ 0.16
RFX4-212ENST00000552917 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
RFX4-212ENST00000552917 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
RFX4-212ENST00000552917 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
RFX4-212ENST00000552917 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
RFX4-212ENST00000552917 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
RFX4-212ENST00000552917 SETDB2Q96T68 719 aa16.04■□□□□ 0.16
RFX4-212ENST00000552917 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
RFX4-212ENST00000552917 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
RFX4-212ENST00000552917 CARMIL3Q8ND23 1372 aa16.03■□□□□ 0.16
RFX4-212ENST00000552917 RGL2O15211 777 aa16.03■□□□□ 0.16
RFX4-212ENST00000552917 ANP32CO43423 234 aa16.03■□□□□ 0.16
RFX4-212ENST00000552917 CHRNA5P30532 468 aa16.03■□□□□ 0.16
RFX4-212ENST00000552917 CHL1O00533 1208 aa16.02■□□□□ 0.16
RFX4-212ENST00000552917 APAF1O14727 1248 aa16.02■□□□□ 0.16
RFX4-212ENST00000552917 CCDC184Q52MB2 194 aa16.02■□□□□ 0.16
RFX4-212ENST00000552917 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
RFX4-212ENST00000552917 KDM3BQ7LBC6 1761 aa16.02■□□□□ 0.15
RFX4-212ENST00000552917 CHD4Q14839 1912 aa16.02■□□□□ 0.15
RFX4-212ENST00000552917 KIAA1551Q9HCM1 1747 aa16.01■□□□□ 0.15
RFX4-212ENST00000552917 ERBB4Q15303 1308 aa16■□□□□ 0.15
RFX4-212ENST00000552917 SCN7AQ01118 1682 aa16■□□□□ 0.15
RFX4-212ENST00000552917 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
RFX4-212ENST00000552917 NGEFQ8N5V2 710 aa16■□□□□ 0.15
RFX4-212ENST00000552917 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
RFX4-212ENST00000552917 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
RFX4-212ENST00000552917 NPHP1O15259 732 aa15.99■□□□□ 0.15
RFX4-212ENST00000552917 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
RFX4-212ENST00000552917 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
RFX4-212ENST00000552917 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
RFX4-212ENST00000552917 ERVV-1B6SEH8 477 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 H0YIN7 160 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 MYL6BP14649 208 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
RFX4-212ENST00000552917 PDE6BP35913 854 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
RFX4-212ENST00000552917 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms